Guide to the Human Genome
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Name: DKK3 Sequence: fasta or formatted (350aa) NCBI GI: 66346689
Description:

dickkopf homolog 3 precursor

Referenced in:

Wnt Signals

Other entries for this name:
alt mRNA [350aa] dickkopf homolog 3 precursor
alt mRNA [350aa] dickkopf homolog 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         31           6
 C cysteine            6.0         21           2
 D aspartate           4.9         17           1
 E glutamate          11.1         39           2
 F phenylalanine       2.3          8           1
 G glycine             6.3         22           2
 H histidine           2.9         10           1
 I isoleucine          2.9         10           2
 K lysine              2.0          7           1
 L leucine            10.0         35           3
 M methionine          2.9         10           1
 N asparagine          3.1         11           2
 P proline             6.9         24           2
 Q glutamine           4.6         16           1
 R arginine            5.4         19           2
 S serine              5.7         20           2
 T threonine           6.6         23           1
 V valine              5.4         19           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dickkopf homolog 3 precursor 
DKK3                  1.000   dickkopf homolog 3 precursor 
DKK3                  1.000   dickkopf homolog 3 precursor 
DKK4                  0.067   dickkopf homolog 4 precursor 
DKKL1                 0.047   dickkopf-like 1 precursor 
DKK1                  0.044   dickkopf homolog 1 precursor 
DKK2                  0.036   dickkopf homolog 2 precursor 
ITGB6                 0.024   integrin, beta 6 
ITGB3                 0.021   integrin beta chain, beta 3 precursor 
PROK1                 0.021   prokineticin 1 
LAMB3                 0.020   laminin, beta 3 precursor 
LAMB3                 0.020   laminin, beta 3 precursor 
LAMB3                 0.020   laminin, beta 3 precursor 
ITGB5                 0.020   integrin, beta 5 
PROK2                 0.020   prokineticin 2 isoform b precursor 
VCX2                  0.018   variable charge, X-linked 2 
TNIP1                 0.016   TNFAIP3 interacting protein 1 
VCX                   0.016   variable charge, X chromosome 
KRTAP10-2             0.016   keratin associated protein 10-2 
KRTAP10-9             0.016   keratin associated protein 10-9 
VCY1B                 0.014   variable charge, Y-linked 1B 
VCY                   0.014   variable charge, Y-linked 
BBS2                  0.014   Bardet-Biedl syndrome 2 protein 
VCX3A                 0.014   variable charge, X-linked 3A 
KRTAP10-4             0.014   keratin associated protein 10-4 
VCX3B                 0.014   variable charge, X-linked 3B 
LTBP2                 0.013   latent transforming growth factor beta binding protei...
LOC400352             0.013   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.013   PREDICTED: similar to Putative golgin subfamily A m...
KRTAP10-6             0.013   keratin associated protein 10-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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