Guide to the Human Genome
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Name: DKK4 Sequence: fasta or formatted (224aa) NCBI GI: 7657025
Description:

dickkopf homolog 4 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         13           2
 C cysteine            9.4         21           2
 D aspartate           5.8         13           1
 E glutamate           4.9         11           1
 F phenylalanine       2.7          6           1
 G glycine             8.0         18           1
 H histidine           2.7          6           1
 I isoleucine          2.7          6           1
 K lysine              5.8         13           2
 L leucine            10.3         23           2
 M methionine          1.3          3           1
 N asparagine          2.7          6           2
 P proline             5.4         12           1
 Q glutamine           6.7         15           1
 R arginine            9.4         21           3
 S serine              5.4         12           2
 T threonine           6.2         14           2
 V valine              4.0          9           1
 W tryptophan          0.9          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dickkopf homolog 4 precursor 
DKK2                  0.283   dickkopf homolog 2 precursor 
DKK1                  0.265   dickkopf homolog 1 precursor 
DKK3                  0.103   dickkopf homolog 3 precursor 
DKK3                  0.103   dickkopf homolog 3 precursor 
DKK3                  0.103   dickkopf homolog 3 precursor 
PROK1                 0.044   prokineticin 1 
PROK2                 0.035   prokineticin 2 isoform b precursor 
PROK2                 0.024   prokineticin 2 isoform a precursor 
C1orf187              0.022   chromosome 1 open reading frame 187 
ADAM33                0.022   ADAM metallopeptidase domain 33 isoform alpha prepro...
GZF1                  0.018   GDNF-inducible zinc finger protein 1 
ADAM33                0.015   ADAM metallopeptidase domain 33 isoform beta preprop...
KRTAP4-9              0.015   PREDICTED: keratin associated protein 4-9 isoform 1...
PEAR1                 0.015   platelet endothelial aggregation receptor 1 
MBD1                  0.013   methyl-CpG binding domain protein 1 isoform PCM1 [Ho...
KRTAP4-9              0.011   keratin associated protein 4-9 
KRTAP10-11            0.011   keratin associated protein 10-11 
KRTAP2-1              0.011   keratin associated protein KRTAP2.1A 
KRTAP2-4              0.011   keratin associated protein 2-4 
KRTAP2-2              0.011   keratin associated protein 2-2 
LOC730755             0.011   PREDICTED: similar to keratin associated protein 2-...
MEGF6                 0.011   EGF-like-domain, multiple 3 
DDX11                 0.011   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
KRTAP4-5              0.011   keratin associated protein 4-5 
TNFRSF10D             0.009   tumor necrosis factor receptor superfamily, member 1...
MBD1                  0.009   methyl-CpG binding domain protein 1 isoform 2 
TTLL5                 0.009   tubulin tyrosine ligase-like family, member 5 
CHRD                  0.009   chordin 
WFDC2                 0.009   WAP four-disulfide core domain 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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