Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DKK2 Sequence: fasta or formatted (259aa) NCBI GI: 7657023
Description:

dickkopf homolog 2 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         16           2
 C cysteine            8.5         22           2
 D aspartate           3.9         10           1
 E glutamate           3.5          9           1
 F phenylalanine       1.5          4           1
 G glycine             9.7         25           2
 H histidine           5.8         15           1
 I isoleucine          4.2         11           1
 K lysine              8.5         22           3
 L leucine             7.3         19           4
 M methionine          2.7          7           1
 N asparagine          3.1          8           2
 P proline             3.9         10           1
 Q glutamine           3.9         10           1
 R arginine            6.9         18           2
 S serine             10.4         27           2
 T threonine           3.5          9           1
 V valine              3.5          9           1
 W tryptophan          1.2          3           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dickkopf homolog 2 precursor 
DKK1                  0.328   dickkopf homolog 1 precursor 
DKK4                  0.242   dickkopf homolog 4 precursor 
DKK3                  0.047   dickkopf homolog 3 precursor 
DKK3                  0.047   dickkopf homolog 3 precursor 
DKK3                  0.047   dickkopf homolog 3 precursor 
PROK2                 0.028   prokineticin 2 isoform b precursor 
PROK1                 0.028   prokineticin 1 
SCARF2                0.028   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.028   scavenger receptor class F, member 2 isoform 2 [Homo...
MEGF11                0.026   multiple EGF-like-domains 11 
PEAR1                 0.021   platelet endothelial aggregation receptor 1 
MEGF10                0.021   multiple EGF-like-domains 10 
PROK2                 0.017   prokineticin 2 isoform a precursor 
FRAS1                 0.017   Fraser syndrome 1 
SCARF1                0.015   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.015   scavenger receptor class F, member 1 isoform 1 precu...
SNED1                 0.015   6720455I24Rik homolog 
MEGF6                 0.015   EGF-like-domain, multiple 3 
TES                   0.015   testin isoform 1 
TES                   0.015   testin isoform 2 
LRP12                 0.015   low density lipoprotein-related protein 12 isoform ...
LRP12                 0.015   low density lipoprotein-related protein 12 isoform a ...
ZNF641                0.015   zinc finger protein 641 
ITGB6                 0.013   integrin, beta 6 
C1orf187              0.013   chromosome 1 open reading frame 187 
KRTAP5-7              0.013   keratin associated protein 5-7 
C6orf127              0.011   hypothetical protein LOC340204 
SSPO                  0.009   SCO-spondin 
KRTAP5-10             0.009   keratin associated protein 5-10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press