Guide to the Human Genome
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Name: PROK2 Sequence: fasta or formatted (129aa) NCBI GI: 187167261
Description:

prokineticin 2 isoform a precursor

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [108aa] prokineticin 2 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          8           2
 C cysteine            9.3         12           2
 D aspartate           3.1          4           1
 E glutamate           1.6          2           1
 F phenylalanine       3.9          5           2
 G glycine             8.5         11           3
 H histidine           2.3          3           2
 I isoleucine          3.9          5           1
 K lysine              7.8         10           2
 L leucine            13.2         17           7
 M methionine          3.1          4           1
 N asparagine          3.1          4           2
 P proline             7.0          9           2
 Q glutamine           2.3          3           1
 R arginine           10.9         14           2
 S serine              5.4          7           1
 T threonine           4.7          6           1
 V valine              3.1          4           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prokineticin 2 isoform a precursor 
PROK2                 0.786   prokineticin 2 isoform b precursor 
PROK1                 0.329   prokineticin 1 
DKK1                  0.052   dickkopf homolog 1 precursor 
DKK4                  0.044   dickkopf homolog 4 precursor 
DKK2                  0.036   dickkopf homolog 2 precursor 
DKK3                  0.028   dickkopf homolog 3 precursor 
DKK3                  0.028   dickkopf homolog 3 precursor 
DKK3                  0.028   dickkopf homolog 3 precursor 
ADAMTS2               0.020   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.020   ADAM metallopeptidase with thrombospondin type 1 mo...
KRT81                 0.020   keratin, hair, basic, 1 
NPR1                  0.016   natriuretic peptide receptor 1 
LAMA1                 0.012   laminin, alpha 1 precursor 
INVS                  0.012   inversin isoform a 
INVS                  0.012   inversin isoform b 
ATRN                  0.012   attractin isoform 2 
ATRN                  0.012   attractin isoform 1 
PLA2G10               0.012   phospholipase A2, group X 
SCUBE2                0.008   CEGP1 protein 
LOC100133599          0.008   PREDICTED: hypothetical protein 
PLA2G4E               0.008   phospholipase A2, group 4E 
AP3D1                 0.008   adaptor-related protein complex 3, delta 1 subunit ...
AP3D1                 0.008   adaptor-related protein complex 3, delta 1 subunit ...
CHD7                  0.008   chromodomain helicase DNA binding protein 7 
MED1                  0.008   mediator complex subunit 1 
MUC1                  0.004   mucin 1 isoform 2 precursor 
LAMC1                 0.004   laminin, gamma 1 precursor 
MUC1                  0.004   mucin 1 isoform 7 precursor 
HCRT                  0.004   orexin precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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