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Search of human proteins with 7656938
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens]
(187 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens] 377 e-105
gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens] 56 2e-08
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 42 4e-04
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 41 5e-04
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 41 5e-04
gi|209862789 microtubule associated monoxygenase, calponin and L... 39 0.002
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 39 0.003
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens] 39 0.003
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 39 0.003
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 39 0.003
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 39 0.003
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 39 0.003
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.003
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens] 38 0.004
gi|42476169 Paf1, RNA polymerase II associated factor, homolog [... 37 0.008
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 37 0.010
gi|13027602 DDRGK domain containing 1 [Homo sapiens] 37 0.010
gi|115529449 upstream binding transcription factor, RNA polymera... 36 0.017
gi|115529451 upstream binding transcription factor, RNA polymera... 36 0.017
gi|7657671 upstream binding transcription factor, RNA polymerase... 36 0.017
gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens] 36 0.022
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 36 0.022
gi|23397574 sorting nexin 33 [Homo sapiens] 36 0.022
gi|8923009 non-SMC element 4 homolog A [Homo sapiens] 36 0.022
gi|46276863 parathymosin [Homo sapiens] 35 0.029
>gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens]
Length = 187
Score = 377 bits (967), Expect = e-105
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 1 MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEE 60
MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEE
Sbjct: 1 MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEE 60
Query: 61 EEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGA 120
EEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGA
Sbjct: 61 EEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGA 120
Query: 121 GYRVSAALEEADKMFLRTREPALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGC 180
GYRVSAALEEADKMFLRTREPALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGC
Sbjct: 121 GYRVSAALEEADKMFLRTREPALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGC 180
Query: 181 DEIIDRE 187
DEIIDRE
Sbjct: 181 DEIIDRE 187
>gi|63175652 CREBBP/EP300 inhibitor 2 [Homo sapiens]
Length = 236
Score = 56.2 bits (134), Expect = 2e-08
Identities = 65/236 (27%), Positives = 85/236 (36%), Gaps = 55/236 (23%)
Query: 7 LSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELS-----------LRPSRSGAQQLEEE 55
+S+L +SS Q G+ D+PQ EVG G RE + + +R G E
Sbjct: 1 MSKLPADSSVPQTGAANGDRDVPQAEVGRGRREPAPAQPEEAGEGAMAAARGGPVPAARE 60
Query: 56 GPMEEEEAQPMAAPEGK----RSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDY 111
G M A P AA G +LA AG + A A E D +
Sbjct: 61 GRMAAARAAPAAAARGAPVAAAALARAAAAGRESPAAAAAREARMAEVARLLGEPVDEEG 120
Query: 112 PEEEQLSGAGYRVSAAL-------------------------------------EEADKM 134
PE S G AAL EE +
Sbjct: 121 PEGRPRSRHGNGGLAALPYLRLRHPLSVLGINYQQFLRHYLENYPIAPGRIQELEERRRR 180
Query: 135 FL---RTREPALDGGFQMHYEKTPFDQLAFIEELFSLMVVNRLTEELGCDEIIDRE 187
F+ R RE A D +Q + + D L F L + V+N L EELGCD+ I+RE
Sbjct: 181 FVEACRAREAAFDAEYQRNPHRVDLDILTFTIALTASEVINPLIEELGCDKFINRE 236
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 41.6 bits (96), Expect = 4e-04
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 24 GEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGE 83
GEG+ + E G G E ++ E EG EE E + EG+ G GE
Sbjct: 847 GEGEEEEGE-GKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGE 905
Query: 84 QPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGAG 121
+ G+ G + E E +GEE + E+ EEE+ G G
Sbjct: 906 EEGEGEGEEEEGEGKGEE--EGEEGEGEGEEEEGEGEG 941
Score = 40.0 bits (92), Expect = 0.001
Identities = 40/133 (30%), Positives = 54/133 (40%), Gaps = 10/133 (7%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E E E EE + + + EG+ E G G E G + E EG EEEE
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE---EEEGEGEGEEEGEGEGEEEE 916
Query: 63 AQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPE---EEQLSG 119
+ EG+ G E+ G+ G D E E E EE +WE + + E EE+ G
Sbjct: 917 GEGKGEEEGEEGEGEGE---EEEGEGEGEDGEGEGEEEE-GEWEGEEEEGEGEGEEEGEG 972
Query: 120 AGYRVSAALEEAD 132
G EE +
Sbjct: 973 EGEEGEGEGEEEE 985
Score = 38.5 bits (88), Expect = 0.003
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 6 ELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPM---EEEE 62
E E+ E + + + GEG+ E G G E G + EEEG EEE
Sbjct: 815 EGGEVEEGKGEREEEEEEGEGE---EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEG 871
Query: 63 AQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGAG 121
+ EG+ G GE+ G+ G + E E EGEE + E EEE+ G G
Sbjct: 872 EE----GEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEG-----EEEEGEGKG 921
Score = 38.1 bits (87), Expect = 0.004
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 24 GEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGE 83
GEG+ + E G G E ++ E E EEEE + EG+ G GE
Sbjct: 928 GEGE-GEEEEGEGEGE----DGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGE 982
Query: 84 QP-GQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSG 119
+ G+ G + E E+EGEE + E++ + EE+ G
Sbjct: 983 EEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEG 1019
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 11/111 (9%)
Query: 12 EESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEG 71
EE + + + GEG+ + G G E G + EEEG E E + EG
Sbjct: 888 EEEGEGEGEEEEGEGEGEEEGEGEGEEE-------EGEGKGEEEGEEGEGEGEE---EEG 937
Query: 72 KRSLANGPNAGEQP-GQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGAG 121
+ +G GE+ G+ G + E E EGEE + E + E E+ G G
Sbjct: 938 EGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEG 988
Score = 35.4 bits (80), Expect = 0.029
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 12 EESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEG 71
EE + + + GEG+ + G G ++ E EG EEEE + EG
Sbjct: 950 EEEGEWEGEEEEGEGEGEEEGEGEGEE------GEGEGEEEEGEGEGEEEEGEEEGEEEG 1003
Query: 72 K-RSLANGPNAGEQPGQVAG--ADFESEDEGEEFDDWEDDYDYPEEEQLSGAGYRVSAAL 128
+ G E+ G+V G E E EGEE E+ + EE + G G
Sbjct: 1004 EGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEE----EEGEEEGEEREKEGEGEENRRNR 1059
Query: 129 EEADK 133
EE ++
Sbjct: 1060 EEEEE 1064
Score = 32.0 bits (71), Expect = 0.32
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 12 EESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEE-EGPMEEEEAQPMAAPE 70
EE + + + GEG+ + E E G + EE EG EEEE E
Sbjct: 934 EEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEG------E 987
Query: 71 GKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEE 115
G+ G GE+ G+ + E E EGEE ++ E + + EE
Sbjct: 988 GEGEEEEGEEEGEEEGE---GEEEGEGEGEEEEEGEVEGEVEGEE 1029
Score = 30.8 bits (68), Expect = 0.71
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 10/122 (8%)
Query: 12 EESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEG 71
EE + + GEG E G G R G ++ EE EE+ + EG
Sbjct: 741 EEGDREEEEEKEGEGK----EEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEG 796
Query: 72 KRSLANGPNAG-EQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGAGYRVSAALEE 130
+ G E+ G+V G + E E +GE E++ + E E+ G G EE
Sbjct: 797 EEEETEGRGEEKEEGGEVEGGEVE-EGKGER----EEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 131 AD 132
+
Sbjct: 852 EE 853
Score = 30.4 bits (67), Expect = 0.93
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 1 MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGS-------RELSLRPSRSGAQQLE 53
+++ AE+SE +S D G GD E SG+ RE + G +
Sbjct: 630 LTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERP 689
Query: 54 EEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPE 113
EG E E + +G+ G Q + + E E E + E++ D E
Sbjct: 690 GEGEKELAEKEEWKKRDGEEQEQKEREQGHQKER--NQEMEEGGEEEHGEGEEEEGDREE 747
Query: 114 EEQLSGAG 121
EE+ G G
Sbjct: 748 EEEKEGEG 755
Score = 29.3 bits (64), Expect = 2.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 24 GEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGE 83
GEG+ + E G E+ + EEEG E EE + EG+ + N E
Sbjct: 1009 GEGEGEEEEEGEVEGEVEGEEGEGEGE--EEEGEEEGEEREKEG--EGEENRRNREEEEE 1064
Query: 84 QPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGA 120
+ G+ ++ GEE ++ +D +Y + ++ G+
Sbjct: 1065 EEGKY-------QETGEEENERQDGEEYKKVSKIKGS 1094
Score = 28.9 bits (63), Expect = 2.7
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 53 EEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYP 112
EEEG EEEE + EGK GE+ + E EE + E D
Sbjct: 740 EEEGDREEEEEKE---GEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEG 796
Query: 113 EEEQLSGAG 121
EEE+ G G
Sbjct: 797 EEEETEGRG 805
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 41.2 bits (95), Expect = 5e-04
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 27/136 (19%)
Query: 1 MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEE 60
+++MA+L EL S LP GS +R R+ + EEE EE
Sbjct: 5 ITDMADLEELSRLSP------------LPPGSPGSAAR------GRAEPPEEEEEEEEEE 46
Query: 61 EEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDE---------GEEFDDWEDDYDY 111
EEA+ A + +G G G V G + E+ E GE+ D+ EDD +
Sbjct: 47 EEAEAEAVAALLLNGGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEE 106
Query: 112 PEEEQLSGAGYRVSAA 127
+E SG G S+A
Sbjct: 107 EDESSSSGGGEEESSA 122
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 41.2 bits (95), Expect = 5e-04
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 27/136 (19%)
Query: 1 MSEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEE 60
+++MA+L EL S LP GS +R R+ + EEE EE
Sbjct: 5 ITDMADLEELSRLSP------------LPPGSPGSAAR------GRAEPPEEEEEEEEEE 46
Query: 61 EEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDE---------GEEFDDWEDDYDY 111
EEA+ A + +G G G V G + E+ E GE+ D+ EDD +
Sbjct: 47 EEAEAEAVAALLLNGGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEE 106
Query: 112 PEEEQLSGAGYRVSAA 127
+E SG G S+A
Sbjct: 107 EDESSSSGGGEEESSA 122
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 39.3 bits (90), Expect = 0.002
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 45 SRSGAQQLEEEGPMEEEEAQPMAAPEGK-----------RSLANGPNAGEQPGQVA---G 90
S S ++EEEG EEEE +P P +L G + E + G
Sbjct: 933 SSSSESEMEEEG--EEEEEEPRLPPSDLGGVPWKEAVRIHALLKGKSEEELEASKSFGPG 990
Query: 91 ADFESEDEGEEFDDWEDDYDYPEEEQLSGAGYRVSAALEEADKM 134
+ E E+E E ++ E+DYD EEE R+ + AD +
Sbjct: 991 NEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQVMHAADPL 1034
Score = 27.3 bits (59), Expect = 7.9
Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 21/151 (13%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPME--- 59
E E E YEE + D + E S + L+ A LE + +
Sbjct: 993 EEEEEEEEYEEEEEEDYD--------EEEEESSEAGNQRLQQVMHAADPLEIQADVHWTH 1044
Query: 60 --EEEAQPMAAPEGKRSLANGP--------NAGEQPGQVAGADFESEDEGEEFDDWEDDY 109
E E + AP + S + P + +P ++ G E D G+ + +DD
Sbjct: 1045 IREREEEERMAPASESSASGAPLDENDLEEDVDSEPAEIEGEAAEDGDPGDTGAELDDDQ 1104
Query: 110 DYPEEEQLSGAGYRVSAALEEADKMFLRTRE 140
+ + + R+ E ++ LR E
Sbjct: 1105 HWSDSPSDADRELRLPCPAEGEAELELRVSE 1135
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 30 QMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVA 89
+++ GSG +S + + + E E EEEE + + GKRS G + Q
Sbjct: 101 RLKCGSGPVHISGQHLVAVEEDAESED--EEEEDVKLLSISGKRSAPGGGSKVPQKKVKL 158
Query: 90 GADFESEDEGEEFDDWEDDYDYPEEEQ 116
AD + +D+ EE DD +DD D ++E+
Sbjct: 159 AADEDDDDDDEEDDDEDDDDDDFDDEE 185
>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
Length = 265
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 30 QMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVA 89
+++ GSG +S + + + E E EEEE + + GKRS G + Q
Sbjct: 101 RLKCGSGPVHISGQHLVAVEEDAESED--EEEEDVKLLSISGKRSAPGGGSKVPQKKVKL 158
Query: 90 GADFESEDEGEEFDDWEDDYDYPEEEQ 116
AD + +D+ EE DD +DD D ++E+
Sbjct: 159 AADEDDDDDDEEDDDEDDDDDDFDDEE 185
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 30 QMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVA 89
+++ GSG +S + + + E E EEEE + + GKRS G + Q
Sbjct: 101 RLKCGSGPVHISGQHLVAVEEDAESED--EEEEDVKLLSISGKRSAPGGGSKVPQKKVKL 158
Query: 90 GADFESEDEGEEFDDWEDDYDYPEEEQ 116
AD + +D+ EE DD +DD D ++E+
Sbjct: 159 AADEDDDDDDEEDDDEDDDDDDFDDEE 185
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 232 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 291
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 292 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 351
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 352 FDRDSGESEEAEEEVGEGTPQSSALTEGD 380
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 242 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 301
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 361
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 362 FDRDSGESEEAEEEVGEGTPQSSALTEGD 390
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 38.9 bits (89), Expect = 0.003
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 53 EEEGPMEEEEAQPMAAPEGK------RSLANGPNAGEQPGQVAGADFESEDEGEEFDDWE 106
++E +EEEAQ +G+ LA G G+ PG +G +SEDE EE ++ E
Sbjct: 622 DDEEEEDEEEAQGSGESDGEDGAWQGSQLARGARLGQPPGVRSGGSTDSEDEEEEDEEEE 681
Query: 107 DD 108
+D
Sbjct: 682 ED 683
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 233 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 292
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 293 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 352
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 353 FDRDSGESEEAEEEVGEGTPQSSALTEGD 381
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 242 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 301
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 361
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 362 FDRDSGESEEAEEEVGEGTPQSSALTEGD 390
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 210 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 269
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 270 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 329
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 330 FDRDSGESEEAEEEVGEGTPQSSALTEGD 358
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 199 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 258
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 259 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 318
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 319 FDRDSGESEEAEEEVGEGTPQSSALTEGD 347
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 3 EMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEE 62
E+ + + +E + D++ D+ E + S E S S SG+++ EEE EEEE
Sbjct: 244 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 303
Query: 63 A---------QPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW-------- 105
+ E + + +N A EQ + + SEDE E ++
Sbjct: 304 GSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 363
Query: 106 --EDDYDYPEEEQLSGAGYRVSAALEEAD 132
D + E E+ G G S+AL E D
Sbjct: 364 FDRDSGESEEAEEEVGEGTPQSSALTEGD 392
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 38.5 bits (88), Expect = 0.003
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 18 QMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEA---------QPMAA 68
+ D++ D+ E + S E S S SG+++ EEE EEEE +
Sbjct: 3 ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEE 62
Query: 69 PEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDW----------EDDYDYPEEEQLS 118
E + + +N A EQ + + SEDE E ++ D + E E+
Sbjct: 63 EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEV 122
Query: 119 GAGYRVSAALEEAD 132
G G S+AL E D
Sbjct: 123 GEGTPQSSALTEGD 136
>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
Length = 4861
Score = 38.1 bits (87), Expect = 0.004
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 25/158 (15%)
Query: 5 AELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQ-------------- 50
A + L + SS L P +P +E+G R+++ +GA+
Sbjct: 2732 ANRTALSDPSSRLSTSPPPPAIAVPLLEMGFSLRQIAKAMEATGARGEADAQNITVLAMW 2791
Query: 51 QLEEEGPMEEEEAQ--------PMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEF 102
+E G +EEE Q P AA G +N P + PG + AD +EG F
Sbjct: 2792 MIEHPGHEDEEEPQSGSTADSRPGAAVLGSGGKSNDPCYLQSPGDIPSADAAEMEEG--F 2849
Query: 103 DDWEDDYDYPEEEQL-SGAGYRVSAALEEADKMFLRTR 139
+ D+ D+ E SG R +A+ K L R
Sbjct: 2850 SESPDNLDHTENAASGSGPSARGRSAVTRRHKFDLAAR 2887
>gi|42476169 Paf1, RNA polymerase II associated factor, homolog
[Homo sapiens]
Length = 531
Score = 37.4 bits (85), Expect = 0.008
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 12 EESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEG 71
EE +++ + G + E GS S + SG++ EEG + +EA +
Sbjct: 379 EEEEEMETEEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESEREEG--DRDEASDKSGSGE 436
Query: 72 KRSLANGPNAGEQPGQVAGADFESEDEGEEFDD 104
S + A ++ G+D +SED+ + D+
Sbjct: 437 DESSEDEARAARDKEEIFGSDADSEDDADSDDE 469
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 37.0 bits (84), Expect = 0.010
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Query: 2 SEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEE- 60
SE+ E E EE+ DV + ++EV + E +P + E EG M+E
Sbjct: 1958 SEVIESQEAEEEAQPESEDV-----EALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEA 2012
Query: 61 -EEAQPMAAPEGKRSLANGPNAGEQPG--QVAGADFESEDEGEEFDDWEDDYDYPEEEQL 117
EEAQP + + + G A E G Q D + E +G E + E++ E E
Sbjct: 2013 EEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQ 2072
Query: 118 SGAG 121
G
Sbjct: 2073 EAEG 2076
Score = 32.7 bits (73), Expect = 0.19
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 3/127 (2%)
Query: 9 ELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQ--QLEEEGPMEEEEAQPM 66
E ES D++ GE +V + E ++P GA+ + E+E E E + +
Sbjct: 1866 EAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEAL 1925
Query: 67 AAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWE-DDYDYPEEEQLSGAGYRVS 125
+ G A E A+ +++ E E + E ++ PE E + V
Sbjct: 1926 ETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVE 1985
Query: 126 AALEEAD 132
E +
Sbjct: 1986 TQEAEGE 1992
Score = 30.4 bits (67), Expect = 0.93
Identities = 40/172 (23%), Positives = 58/172 (33%), Gaps = 27/172 (15%)
Query: 2 SEMAELSELYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEE 61
SE E E+ E+ + D P + E ++E + + E ++ +
Sbjct: 2029 SEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQ 2088
Query: 62 EAQPMAAP----------EGKRSLANGPNAGEQPGQV-----------AGADFESEDEGE 100
EA+ A P EG+ A G A E G+ A + + E EG
Sbjct: 2089 EAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGV 2148
Query: 101 EFDDWEDDYDYPEEEQLSGAGYRVSAALEEADKMFLRTREPALDGGFQMHYE 152
E D E + PE E G A EEA P +G Q E
Sbjct: 2149 EAQDAEGEAQ-PESE-----GIEAQEAEEEAQPELEGVEAPEAEGEAQPESE 2194
Score = 29.3 bits (64), Expect = 2.1
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 10 LYEESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPMEEEEAQPMAAP 69
L EE L+ EG L + G +E + L EEG + +E ++P
Sbjct: 1367 LQEEGVQLEEVKEGPEGGLQGEALEEGLKE----------EGLPEEGSVHGQELSEASSP 1416
Query: 70 EGKRSLANGPNAGEQPGQVAGADFESEDEGEE 101
+GK S + P E+ G+ + + EG E
Sbjct: 1417 DGKGSQEDDPVQEEEAGRASASAEPCPAEGTE 1448
Score = 29.3 bits (64), Expect = 2.1
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 44 PSRSGAQQLEEEG---PMEEEEAQP----MAAPEGKRSLANGPNAGEQPGQVAGADFESE 96
P G Q E EG P E EAQP + APE + P E P A ESE
Sbjct: 2183 PEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESE 2242
Query: 97 DE 98
E
Sbjct: 2243 GE 2244
>gi|13027602 DDRGK domain containing 1 [Homo sapiens]
Length = 314
Score = 37.0 bits (84), Expect = 0.010
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 47 SGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADF-ESEDEGEEFDDW 105
+GA ++ + GP+E EE + P +R L + A + +VA A+ E+E+E
Sbjct: 42 AGAGRVAQPGPLEPEEPRAGGRPRRRRDLGSRLQAQRRAQRVAWAEADENEEEAVILAQE 101
Query: 106 EDDYDYPEEEQLSG-AGYRVSAALEE 130
E+ + P E LSG G + LEE
Sbjct: 102 EEGVEKPAETHLSGKIGAKKLRKLEE 127
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 36.2 bits (82), Expect = 0.017
Identities = 20/88 (22%), Positives = 45/88 (51%)
Query: 45 SRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDD 104
S+S +++ +EE +E+E + E S +G ++ E + D + +E +E +D
Sbjct: 636 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDED 695
Query: 105 WEDDYDYPEEEQLSGAGYRVSAALEEAD 132
++D D E+ + G+ S++ + +D
Sbjct: 696 DDEDDDEDEDNESEGSSSSSSSSGDSSD 723
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 36.2 bits (82), Expect = 0.017
Identities = 20/88 (22%), Positives = 45/88 (51%)
Query: 45 SRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDD 104
S+S +++ +EE +E+E + E S +G ++ E + D + +E +E +D
Sbjct: 636 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDED 695
Query: 105 WEDDYDYPEEEQLSGAGYRVSAALEEAD 132
++D D E+ + G+ S++ + +D
Sbjct: 696 DDEDDDEDEDNESEGSSSSSSSSGDSSD 723
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 36.2 bits (82), Expect = 0.017
Identities = 20/88 (22%), Positives = 45/88 (51%)
Query: 45 SRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDD 104
S+S +++ +EE +E+E + E S +G ++ E + D + +E +E +D
Sbjct: 673 SKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDED 732
Query: 105 WEDDYDYPEEEQLSGAGYRVSAALEEAD 132
++D D E+ + G+ S++ + +D
Sbjct: 733 DDEDDDEDEDNESEGSSSSSSSSGDSSD 760
>gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens]
Length = 1720
Score = 35.8 bits (81), Expect = 0.022
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 48 GAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWED 107
G + E+EG +EEE + E + A+ +A + Q D+ESE+E E + D
Sbjct: 1384 GRSRGEQEG--DEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEND 1441
Query: 108 DYDYPEEEQLSGAGYRVSAALEEADKMFLRTRE 140
D D EE G R + E+ +++ L T E
Sbjct: 1442 DEDMQEERNPHREGARKTQ--EQDEEVGLGTEE 1472
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 35.8 bits (81), Expect = 0.022
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 12 EESSDLQMDVMPGEGDLPQMEVGSGSRELSLRPSRS-GAQQLEEEGPMEEEEAQPMAAPE 70
EE + D P +G S + + S++ G +L + G +P A
Sbjct: 1736 EEDEEFLKDEWPAQGPSSSKLTPSLLCSMVAKNSKAAGGPKLTKRGLAAPRTLKPKPATS 1795
Query: 71 GKRSLANGPNAGEQPGQVAGADFESEDEGEEFDDWEDDYDYPEEEQLSGAGYRVSA 126
K+ E + + ES D+ E ++ +++ + EE++ SG GYR+ A
Sbjct: 1796 RKQPFCLLLREAEARSSFSDSSEESFDQDESSEEEDEEEELEEEDEASGGGYRLGA 1851
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 35.8 bits (81), Expect = 0.022
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 63 AQPMAAPEGKRSLANGPNAGEQPGQVAGADFES------EDEGEEFDDWEDDYDYPEEEQ 116
+ P +P + SL N P+ G+ F S ED+ +++DDW+D EE +
Sbjct: 72 SSPAGSPGAQVSLYNSPSVASPARSGGGSGFLSNQGSFEEDDDDDWDDWDDGCTVVEEPR 131
Query: 117 LSGAG 121
G G
Sbjct: 132 AGGLG 136
>gi|8923009 non-SMC element 4 homolog A [Homo sapiens]
Length = 385
Score = 35.8 bits (81), Expect = 0.022
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Query: 115 EQLSGAGYRVSAALEEADKMF---LRTREPALDGGF-------------QMHYEKTPFDQ 158
E + AG +++ LEEA+ +F R RE LD F Q+ + + FD
Sbjct: 101 EDILNAGDKLTEVLEEANTLFNEVSRAREAVLDAHFLVLASDLGIEKAKQLRSDLSSFDM 160
Query: 159 LAFIEELFSLMVVNRL-TEELGCDE 182
L ++E L + M VN L EEL DE
Sbjct: 161 LRYVETLLTHMGVNPLEAEELIRDE 185
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 35.4 bits (80), Expect = 0.029
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Query: 39 ELSLRPSRSGAQQLEEEGPMEEEEAQPMAAPEGKRSLANGPNAGEQPGQVAGADFESEDE 98
ELS + + +++EE+ +E + + + E N E+ + D E EDE
Sbjct: 11 ELSAKDLKEKKEKVEEKASRKERKKEVVEEEE---------NGAEEEEEETAEDGEEEDE 61
Query: 99 GEEFDDWEDDYDYPEEEQLSGAGYRVSAALEEADK 133
GEE D+ EEE+ G + A EE D+
Sbjct: 62 GEEEDE--------EEEEEDDEGPALKRAAEEEDE 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,035,740
Number of Sequences: 37866
Number of extensions: 436192
Number of successful extensions: 3306
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 2489
Number of HSP's gapped (non-prelim): 752
length of query: 187
length of database: 18,247,518
effective HSP length: 96
effective length of query: 91
effective length of database: 14,612,382
effective search space: 1329726762
effective search space used: 1329726762
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.