NPM1 36453

Name: NPM1	Sequence: fasta or formatted (259aa)		NCBI GI: 83641870
Description: nucleophosmin 1 isoform 3		Referenced in: Centromere Proteins Nucleus and Nucleolus Receptor Tyrosine Kinases p53 Pathway
Other entries for this name: alt prot [294aa] nucleophosmin 1 isoform 1 alt prot [265aa] nucleophosmin 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 18 2 C cysteine 0.8 2 1 D aspartate 12.4 32 6 E glutamate 11.2 29 4 F phenylalanine 1.9 5 1 G glycine 6.2 16 3 H histidine 2.3 6 1 I isoleucine 3.1 8 1 K lysine 11.2 29 2 L leucine 6.2 16 2 M methionine 2.7 7 1 N asparagine 2.7 7 1 P proline 6.2 16 2 Q glutamine 3.9 10 1 R arginine 2.3 6 1 S serine 9.3 24 2 T threonine 3.5 9 1 V valine 6.2 16 2 W tryptophan 0.0 0 0 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleophosmin 1 isoform 3 NPM1 0.990 nucleophosmin 1 isoform 1 NPM1 0.844 nucleophosmin 1 isoform 2 LOC440577 0.668 PREDICTED: similar to nucleophosmin 1 LOC440577 0.668 PREDICTED: similar to nucleophosmin 1 LOC440577 0.668 PREDICTED: similar to nucleophosmin 1 NPM3 0.164 nucleophosmin/nucleoplasmin 3 NPM2 0.136 nucleoplasmin 2 NCL 0.097 nucleolin BAZ2B 0.073 bromodomain adjacent to zinc finger domain, 2B [Homo... UBTF 0.065 upstream binding transcription factor, RNA polymera... UBTF 0.065 upstream binding transcription factor, RNA polymera... UBTF 0.065 upstream binding transcription factor, RNA polymerase... ATAD2 0.061 ATPase family, AAA domain containing 2 EIF3CL 0.055 eukaryotic translation initiation factor 3, subunit... EIF3C 0.055 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.055 eukaryotic translation initiation factor 3, subunit C... AEBP2 0.055 AE binding protein 2 isoform b AEBP2 0.055 AE binding protein 2 isoform a MTERFD2 0.053 MTERF domain containing 2 NOLC1 0.053 nucleolar and coiled-body phosphoprotein 1 CASZ1 0.051 castor homolog 1, zinc finger isoform a SETD1B 0.049 SET domain containing 1B LOC645490 0.049 PREDICTED: similar to hCG1991922 MYT1 0.049 myelin transcription factor 1 GTF2F1 0.049 general transcription factor IIF, polypeptide 1, 74... RBM28 0.049 RNA binding motif protein 28 CENPB 0.047 centromere protein B ESF1 0.047 ABT1-associated protein TAF7L 0.047 TATA box binding protein-associated factor, RNA poly... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.