UBTF 1603

Name: UBTF	Sequence: fasta or formatted (727aa)		NCBI GI: 115529451
Description: upstream binding transcription factor, RNA polymerase I isoform b		Referenced in: Nonhistone Chromosomal Proteins RNA Polymerase and General Transcription Factors
Other entries for this name: alt mRNA [727aa] upstream binding transcription factor, RNA polymerase I isoform b alt prot [764aa] upstream binding transcription factor, RNA polymerase I isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 35 2 C cysteine 0.8 6 1 D aspartate 8.0 58 3 E glutamate 13.5 98 4 F phenylalanine 2.5 18 2 G glycine 3.6 26 2 H histidine 1.5 11 1 I isoleucine 2.5 18 1 K lysine 13.3 97 3 L leucine 7.8 57 2 M methionine 3.4 25 1 N asparagine 3.9 28 2 P proline 5.4 39 3 Q glutamine 5.0 36 2 R arginine 5.4 39 2 S serine 9.2 67 8 T threonine 3.0 22 2 V valine 2.2 16 1 W tryptophan 1.5 11 1 Y tyrosine 2.8 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 upstream binding transcription factor, RNA polymera... UBTF 1.000 upstream binding transcription factor, RNA polymera... UBTF 0.987 upstream binding transcription factor, RNA polymerase... UBTFL3 0.186 PREDICTED: upstream binding transcription factor, R... UBTFL5 0.186 PREDICTED: upstream binding transcription factor, R... UBTFL6 0.177 PREDICTED: upstream binding transcription factor, R... UBTFL6 0.177 PREDICTED: upstream binding transcription factor, R... UBTFL6 0.177 PREDICTED: upstream binding transcription factor, R... UBTFL1 0.176 upstream binding transcription factor, RNA polymera... EIF5B 0.044 eukaryotic translation initiation factor 5B HMGB1 0.039 high-mobility group box 1 WDR87 0.038 NYD-SP11 protein HMGB2 0.037 high-mobility group box 2 HMGB2 0.037 high-mobility group box 2 HMGB2 0.037 high-mobility group box 2 NCL 0.037 nucleolin LOC283685 0.036 PREDICTED: golgi autoantigen, golgin subfamily a-li... ANP32B 0.036 acidic (leucine-rich) nuclear phosphoprotein 32 famil... LOC645490 0.035 PREDICTED: similar to hCG1991922 SP100 0.035 nuclear antigen Sp100 isoform 2 LOC645490 0.035 PREDICTED: similar to hCG1991922 DSPP 0.035 dentin sialophosphoprotein preproprotein MYT1L 0.035 myelin transcription factor 1-like LOC645490 0.035 PREDICTED: similar to hCG1991922 MYST4 0.034 MYST histone acetyltransferase (monocytic leukemia)... CDC2L1 0.034 cell division cycle 2-like 1 (PITSLRE proteins) isof... LOC283685 0.034 PREDICTED: golgi autoantigen, golgin subfamily a-li... BAZ2B 0.034 bromodomain adjacent to zinc finger domain, 2B [Homo... CENPB 0.032 centromere protein B CDC2L2 0.032 cell division cycle 2-like 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.