Guide to the Human Genome
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Name: DDRGK1 Sequence: fasta or formatted (314aa) NCBI GI: 13027602
Description:

DDRGK domain containing 1

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         40           3
 C cysteine            0.0          0           0
 D aspartate           2.2          7           2
 E glutamate          17.8         56           4
 F phenylalanine       2.2          7           1
 G glycine             6.4         20           2
 H histidine           1.0          3           1
 I isoleucine          4.5         14           1
 K lysine              5.4         17           2
 L leucine             9.2         29           2
 M methionine          0.6          2           1
 N asparagine          1.9          6           1
 P proline             3.5         11           1
 Q glutamine           6.7         21           1
 R arginine           10.5         33           4
 S serine              4.1         13           1
 T threonine           3.2         10           1
 V valine              5.4         17           2
 W tryptophan          1.3          4           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDRGK domain containing 1 
TCHH                  0.072   trichohyalin 
INCENP                0.071   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.071   inner centromere protein antigens 135/155kDa isofor...
MAP7D2                0.071   MAP7 domain containing 2 
LOC645202             0.067   PREDICTED: hypothetical protein LOC645202 
LOC283685             0.067   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC100133599          0.066   PREDICTED: hypothetical protein 
LOC727832             0.066   golgi autoantigen, golgin subfamily a-like 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform b 
LOC100133758          0.064   PREDICTED: hypothetical protein, partial 
MYO6                  0.064   myosin VI 
LOC283767             0.064   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.064   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC440243             0.064   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC100294088          0.062   PREDICTED: hypothetical protein, partial 
LOC100133220          0.060   PREDICTED: hypothetical protein 
MAP7D1                0.060   MAP7 domain containing 1 
WDR87                 0.060   NYD-SP11 protein 
CALD1                 0.059   caldesmon 1 isoform 1 
LOC400352             0.059   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.059   PREDICTED: similar to Putative golgin subfamily A m...
LOC100134067          0.057   PREDICTED: hypothetical protein 
LOC100286959          0.057   PREDICTED: hypothetical protein XP_002343921 
DEF6                  0.055   differentially expressed in FDCP 6 homolog 
SFRS17A               0.055   DNA segment on chromosome X and Y (unique) 155 expre...
ACBD3                 0.055   acyl-Coenzyme A binding domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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