POLR1A 113

Name: POLR1A	Sequence: fasta or formatted (1720aa)		NCBI GI: 103471997
Description: DNA-directed RNA polymerase I A		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 110 3 C cysteine 2.0 35 2 D aspartate 4.7 80 3 E glutamate 8.4 144 5 F phenylalanine 3.8 65 3 G glycine 6.2 106 2 H histidine 2.6 44 2 I isoleucine 4.5 77 2 K lysine 6.4 110 3 L leucine 10.8 186 3 M methionine 2.9 50 2 N asparagine 4.0 69 2 P proline 5.1 88 2 Q glutamine 5.0 86 2 R arginine 6.1 105 2 S serine 6.3 108 2 T threonine 4.8 83 2 V valine 6.2 107 2 W tryptophan 0.8 14 1 Y tyrosine 3.1 53 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA-directed RNA polymerase I A POLR2A 0.116 DNA-directed RNA polymerase II A POLR3A 0.110 polymerase (RNA) III (DNA directed) polypeptide A, 1... RPGR 0.010 retinitis pigmentosa GTPase regulator isoform C [Hom... PELP1 0.010 proline, glutamic acid and leucine rich protein 1 [... LOC100294088 0.009 PREDICTED: hypothetical protein, partial DAXX 0.008 death-domain associated protein isoform a DAXX 0.008 death-domain associated protein isoform a DAXX 0.008 death-domain associated protein isoform b CDC2L2 0.008 cell division cycle 2-like 2 isoform 4 CDC2L2 0.008 cell division cycle 2-like 2 isoform 1 UBTF 0.008 upstream binding transcription factor, RNA polymera... UBTF 0.008 upstream binding transcription factor, RNA polymera... UBTF 0.008 upstream binding transcription factor, RNA polymerase... CDC2L1 0.008 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.008 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.008 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.008 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.008 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.008 cell division cycle 2-like 1 (PITSLRE proteins) isof... ANP32B 0.008 acidic (leucine-rich) nuclear phosphoprotein 32 famil... MYST4 0.008 MYST histone acetyltransferase (monocytic leukemia)... MYT1L 0.008 myelin transcription factor 1-like LOC100286959 0.008 PREDICTED: hypothetical protein XP_002343921 RBM25 0.008 RNA binding motif protein 25 ANP32A 0.008 acidic (leucine-rich) nuclear phosphoprotein 32 famil... YTHDC1 0.008 splicing factor YT521-B isoform 2 YTHDC1 0.008 splicing factor YT521-B isoform 1 TRIM44 0.007 DIPB protein MYT1 0.007 myelin transcription factor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.