NPM1 209

Name: NPM1	Sequence: fasta or formatted (294aa)		NCBI GI: 10835063
Description: nucleophosmin 1 isoform 1		Referenced in: Centromere Proteins Nucleus and Nucleolus Receptor Tyrosine Kinases p53 Pathway
Other entries for this name: alt prot [265aa] nucleophosmin 1 isoform 2 alt prot [259aa] nucleophosmin 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 19 2 C cysteine 1.0 3 1 D aspartate 11.6 34 6 E glutamate 10.5 31 4 F phenylalanine 2.4 7 1 G glycine 6.1 18 3 H histidine 1.7 5 1 I isoleucine 3.4 10 1 K lysine 11.2 33 2 L leucine 6.5 19 2 M methionine 2.7 8 1 N asparagine 3.1 9 1 P proline 5.8 17 2 Q glutamine 4.4 13 1 R arginine 2.7 8 1 S serine 8.8 26 2 T threonine 3.4 10 1 V valine 6.1 18 2 W tryptophan 0.7 2 1 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleophosmin 1 isoform 1 NPM1 0.873 nucleophosmin 1 isoform 2 NPM1 0.862 nucleophosmin 1 isoform 3 LOC440577 0.582 PREDICTED: similar to nucleophosmin 1 LOC440577 0.582 PREDICTED: similar to nucleophosmin 1 LOC440577 0.582 PREDICTED: similar to nucleophosmin 1 NPM3 0.143 nucleophosmin/nucleoplasmin 3 NPM2 0.118 nucleoplasmin 2 NCL 0.085 nucleolin BAZ2B 0.063 bromodomain adjacent to zinc finger domain, 2B [Homo... UBTF 0.056 upstream binding transcription factor, RNA polymera... UBTF 0.056 upstream binding transcription factor, RNA polymera... UBTF 0.056 upstream binding transcription factor, RNA polymerase... ATAD2 0.053 ATPase family, AAA domain containing 2 ZRANB2 0.051 zinc finger protein 265 isoform 1 ZRANB2 0.051 zinc finger protein 265 isoform 2 EIF3CL 0.048 eukaryotic translation initiation factor 3, subunit... EIF3C 0.048 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.048 eukaryotic translation initiation factor 3, subunit C... AEBP2 0.048 AE binding protein 2 isoform b AEBP2 0.048 AE binding protein 2 isoform a NOLC1 0.048 nucleolar and coiled-body phosphoprotein 1 MTERFD2 0.046 MTERF domain containing 2 MYT1 0.044 myelin transcription factor 1 DEK 0.044 DEK oncogene isoform 2 DEK 0.044 DEK oncogene isoform 1 CASZ1 0.044 castor homolog 1, zinc finger isoform a HP1BP3 0.042 HP1-BP74 SETD1B 0.042 SET domain containing 1B LOC645490 0.042 PREDICTED: similar to hCG1991922 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.