NPM1 27468

Name: NPM1	Sequence: fasta or formatted (265aa)		NCBI GI: 40353734
Description: nucleophosmin 1 isoform 2		Referenced in: Centromere Proteins Nucleus and Nucleolus Receptor Tyrosine Kinases p53 Pathway
Other entries for this name: alt prot [294aa] nucleophosmin 1 isoform 1 alt prot [259aa] nucleophosmin 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 17 2 C cysteine 1.1 3 1 D aspartate 12.1 32 6 E glutamate 11.7 31 4 F phenylalanine 2.6 7 1 G glycine 6.4 17 3 H histidine 1.9 5 1 I isoleucine 3.4 9 1 K lysine 10.6 28 2 L leucine 7.2 19 2 M methionine 3.0 8 1 N asparagine 2.3 6 1 P proline 5.3 14 2 Q glutamine 4.2 11 1 R arginine 2.3 6 1 S serine 7.5 20 2 T threonine 3.0 8 1 V valine 6.8 18 2 W tryptophan 0.8 2 1 Y tyrosine 1.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleophosmin 1 isoform 2 NPM1 0.971 nucleophosmin 1 isoform 1 NPM1 0.818 nucleophosmin 1 isoform 3 LOC440577 0.641 PREDICTED: similar to nucleophosmin 1 LOC440577 0.641 PREDICTED: similar to nucleophosmin 1 LOC440577 0.641 PREDICTED: similar to nucleophosmin 1 NPM3 0.159 nucleophosmin/nucleoplasmin 3 NPM2 0.118 nucleoplasmin 2 NCL 0.096 nucleolin UBTF 0.059 upstream binding transcription factor, RNA polymera... UBTF 0.059 upstream binding transcription factor, RNA polymera... UBTF 0.059 upstream binding transcription factor, RNA polymerase... BAZ2B 0.053 bromodomain adjacent to zinc finger domain, 2B [Homo... ATAD2 0.053 ATPase family, AAA domain containing 2 MTERFD2 0.051 MTERF domain containing 2 CASZ1 0.049 castor homolog 1, zinc finger isoform a RBM28 0.049 RNA binding motif protein 28 NOLC1 0.047 nucleolar and coiled-body phosphoprotein 1 LOC645490 0.047 PREDICTED: similar to hCG1991922 CENPB 0.045 centromere protein B EIF3CL 0.045 eukaryotic translation initiation factor 3, subunit... EIF3C 0.045 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.045 eukaryotic translation initiation factor 3, subunit C... ESF1 0.045 ABT1-associated protein CHIC1 0.043 cysteine-rich hydrophobic domain 1 HMGB1L1 0.043 high-mobility group box 1-like 1 ZBTB7C 0.043 zinc finger and BTB domain containing 7C LOC645490 0.041 PREDICTED: similar to hCG1991922 GTF2F1 0.041 general transcription factor IIF, polypeptide 1, 74... LOC645490 0.039 PREDICTED: similar to hCG1991922 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.