HERC1 2854

Name: HERC1	Sequence: fasta or formatted (4861aa)		NCBI GI: 126131099
Description: guanine nucleotide exchange factor p532		Referenced in: Ran and Rag Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 358 3 C cysteine 2.5 121 2 D aspartate 5.1 248 2 E glutamate 6.7 328 4 F phenylalanine 2.3 112 2 G glycine 7.7 375 3 H histidine 2.7 132 2 I isoleucine 3.8 185 2 K lysine 4.3 210 2 L leucine 11.5 560 4 M methionine 2.4 116 2 N asparagine 3.1 151 2 P proline 4.8 234 4 Q glutamine 5.0 241 3 R arginine 5.2 255 2 S serine 9.9 479 3 T threonine 5.3 256 3 V valine 6.6 322 3 W tryptophan 1.6 76 2 Y tyrosine 2.1 102 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 guanine nucleotide exchange factor p532 HERC2 0.068 hect domain and RLD 2 HECTD3 0.018 HECT domain containing 3 HERC3 0.016 hect domain and RLD 3 HERC4 0.015 hect domain and RLD 4 isoform b HERC4 0.015 hect domain and RLD 4 isoform a RCBTB2 0.013 regulator of chromosome condensation and BTB domain c... C12orf51 0.013 chromosome 12 open reading frame 51 HERC6 0.013 hect domain and RLD 6 RPGR 0.013 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.013 retinitis pigmentosa GTPase regulator isoform C [Hom... NEDD4 0.012 neural precursor cell expressed, developmentally do... NEDD4 0.012 neural precursor cell expressed, developmentally do... SMURF2 0.012 SMAD specific E3 ubiquitin protein ligase 2 RCBTB1 0.012 regulator of chromosome condensation (RCC1) and BTB ... ITCH 0.012 itchy homolog E3 ubiquitin protein ligase HUWE1 0.012 HECT, UBA and WWE domain containing 1 HERC5 0.012 hect domain and RLD 5 SMURF1 0.012 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.012 Smad ubiquitination regulatory factor 1 isoform 2 [H... LOC100290629 0.012 PREDICTED: hypothetical protein XP_002347563 HACE1 0.012 HECT domain and ankyrin repeat containing, E3 ubiqu... LOC390561 0.011 PREDICTED: similar to hect domain and RLD 2 WWP2 0.011 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.011 WW domain containing E3 ubiquitin protein ligase 2 i... LOC390561 0.011 PREDICTED: similar to hect domain and RLD 2 NEK9 0.011 NIMA-related kinase 9 NEDD4L 0.011 neural precursor cell expressed, developmentally do... NEDD4L 0.011 neural precursor cell expressed, developmentally dow... NEDD4L 0.011 neural precursor cell expressed, developmentally do... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.