Guide to the Human Genome
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Name: SAPS1 Sequence: fasta or formatted (881aa) NCBI GI: 151101459
Description:

SAPS domain family, member 1

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         60           2
 C cysteine            1.2         11           1
 D aspartate           6.2         55           3
 E glutamate           9.5         84           5
 F phenylalanine       3.4         30           2
 G glycine             6.0         53           2
 H histidine           2.4         21           2
 I isoleucine          2.8         25           2
 K lysine              2.7         24           2
 L leucine            12.3        108           3
 M methionine          1.7         15           1
 N asparagine          3.6         32           2
 P proline             8.6         76           3
 Q glutamine           7.3         64           2
 R arginine            4.2         37           2
 S serine              9.1         80           3
 T threonine           5.0         44           2
 V valine              5.3         47           2
 W tryptophan          0.9          8           1
 Y tyrosine            0.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SAPS domain family, member 1 
SAPS2                 0.360   SAPS domain family, member 2 
SAPS3                 0.346   SAPS domain family, member 3 
LOC652875             0.026   PREDICTED: similar to SAPS domain family, member 2 ...
SETD1B                0.024   SET domain containing 1B 
MLL4                  0.024   myeloid/lymphoid or mixed-lineage leukemia 4 
NACA                  0.022   nascent polypeptide-associated complex alpha subuni...
NCOR2                 0.021   nuclear receptor co-repressor 2 isoform 1 
RP1L1                 0.021   retinitis pigmentosa 1-like 1 
CENPB                 0.020   centromere protein B 
FLJ22184              0.019   PREDICTED: hypothetical protein LOC80164 
SETD1A                0.018   SET domain containing 1A 
MAPK8IP2              0.018   mitogen-activated protein kinase 8 interacting protei...
HCN4                  0.018   hyperpolarization activated cyclic nucleotide-gated p...
PRB2                  0.018   proline-rich protein BstNI subfamily 2 
MUC7                  0.018   mucin 7, secreted precursor 
MUC7                  0.018   mucin 7, secreted precursor 
MUC7                  0.018   mucin 7, secreted precursor 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
MAPK8IP2              0.018   mitogen-activated protein kinase 8 interacting protei...
KIAA0754              0.017   hypothetical protein LOC643314 
SRCAP                 0.017   Snf2-related CBP activator protein 
PELP1                 0.017   proline, glutamic acid and leucine rich protein 1 [...
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
MUC4                  0.016   mucin 4 isoform a 
MLL2                  0.016   myeloid/lymphoid or mixed-lineage leukemia 2 
MUC2                  0.016   mucin 2 precursor 
NOLC1                 0.015   nucleolar and coiled-body phosphoprotein 1 
SLC24A1               0.015   solute carrier family 24 (sodium/potassium/calcium ex...
WIPF3                 0.015   WAS/WASL interacting protein family, member 3 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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