Guide to the Human Genome
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Name: HEATR1 Sequence: fasta or formatted (2144aa) NCBI GI: 73695475
Description:

protein BAP28

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        132           3
 C cysteine            1.8         38           2
 D aspartate           4.1         87           2
 E glutamate           7.8        167           3
 F phenylalanine       4.6         98           2
 G glycine             3.2         69           2
 H histidine           2.5         54           3
 I isoleucine          6.7        144           2
 K lysine              7.8        168           3
 L leucine            15.0        321           4
 M methionine          2.2         48           2
 N asparagine          3.7         79           2
 P proline             4.2         89           2
 Q glutamine           5.0        107           2
 R arginine            2.8         59           2
 S serine              7.8        167           2
 T threonine           4.7        100           2
 V valine              7.1        153           3
 W tryptophan          0.8         18           2
 Y tyrosine            2.1         46           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein BAP28 
PPP2R1B               0.003   beta isoform of regulatory subunit A, protein phosph...
PPP2R1B               0.003   beta isoform of regulatory subunit A, protein phosph...
CCDC158               0.002   coiled-coil domain containing 158 
IPO4                  0.002   importin 4 
KIAA1632              0.002   hypothetical protein LOC57724 
LOC100292655          0.002   PREDICTED: similar to armadillo repeat containing, ...
DOCK4                 0.002   dedicator of cytokinesis 4 
HEATR5A               0.002   HEAT repeat containing 5A 
ANKRD17               0.002   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.002   ankyrin repeat domain protein 17 isoform b 
TAF2                  0.002   TBP-associated factor 2 
SACS                  0.002   sacsin 
SAPS1                 0.002   SAPS domain family, member 1 
LOC729196             0.002   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
LOC729196             0.002   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
DES                   0.002   desmin 
SF3B1                 0.002   splicing factor 3b, subunit 1 isoform 1 
CCDC79                0.002   coiled-coil domain containing 79 
DNAJC28               0.002   DnaJ (Hsp40) homolog, subfamily C, member 28 
DNAJC28               0.002   DnaJ (Hsp40) homolog, subfamily C, member 28 
CDK5RAP2              0.002   CDK5 regulatory subunit associated protein 2 isoform...
IKBKAP                0.002   inhibitor of kappa light polypeptide gene enhancer i...
KIAA0427              0.002   hypothetical protein LOC9811 isoform 2 
KRT26                 0.002   keratin 26 
GOLGA4                0.002   golgi autoantigen, golgin subfamily a, 4 
VPS13D                0.002   vacuolar protein sorting 13D isoform 2 
FKBP15                0.002   FK506 binding protein 15, 133kDa 
VPS13D                0.002   vacuolar protein sorting 13D isoform 1 
GPATCH8               0.002   G patch domain containing 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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