Guide to the Human Genome
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Name: PPP2R1B Sequence: fasta or formatted (601aa) NCBI GI: 32455246
Description:

beta isoform of regulatory subunit A, protein phosphatase 2 isoform a

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [667aa] beta isoform of regulatory subunit A, protein phosphatase 2 isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         61           4
 C cysteine            1.8         11           1
 D aspartate           6.0         36           2
 E glutamate           7.7         46           2
 F phenylalanine       3.0         18           2
 G glycine             4.7         28           2
 H histidine           1.2          7           1
 I isoleucine          5.7         34           2
 K lysine              5.0         30           2
 L leucine            14.0         84           2
 M methionine          2.5         15           1
 N asparagine          4.0         24           2
 P proline             4.2         25           2
 Q glutamine           4.7         28           2
 R arginine            4.5         27           2
 S serine              5.8         35           1
 T threonine           4.7         28           2
 V valine              8.2         49           2
 W tryptophan          0.8          5           1
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta isoform of regulatory subunit A, protein phosph... 
PPP2R1B               0.996   beta isoform of regulatory subunit A, protein phosph...
PPP2R1A               0.856   alpha isoform of regulatory subunit A, protein phosp...
PPP4R4                0.035   HEAT-like repeat-containing protein isoform 1 
PPP4R1                0.035   protein phosphatase 4, regulatory subunit 1 isoform b...
PPP4R1                0.035   protein phosphatase 4, regulatory subunit 1 isoform...
GCN1L1                0.024   GCN1 general control of amino-acid synthesis 1-like ...
SF3B1                 0.022   splicing factor 3b, subunit 1 isoform 1 
HEATR2                0.014   HEAT repeat containing 2 
PIK3R4                0.013   phosphoinositide-3-kinase, regulatory subunit 4 [Hom...
CAND2                 0.012   TBP-interacting protein isoform 1 
MTOR                  0.011   FK506 binding protein 12-rapamycin associated protein...
HTT                   0.011   huntingtin 
FAM179B               0.011   hypothetical protein LOC23116 
CAND2                 0.011   TBP-interacting protein isoform 2 
KPNB1                 0.011   karyopherin beta 1 
HEATR1                0.010   protein BAP28 
TNPO2                 0.009   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.009   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.009   transportin 2 (importin 3, karyopherin beta 2b) isof...
RTDR1                 0.008   rhabdoid tumor deletion region protein 1 
PSME4                 0.007   proteasome (prosome, macropain) activator subunit 4...
HSPA9                 0.006   heat shock 70kDa protein 9 precursor 
FGD6                  0.006   FYVE, RhoGEF and PH domain containing 6 
SCYL3                 0.005   SCY1-like 3 isoform 2 
SCYL3                 0.005   SCY1-like 3 isoform 1 
EPS15L1               0.005   epidermal growth factor receptor pathway substrate 1...
KIAA1468              0.005   hypothetical protein LOC57614 
STK36                 0.004   serine/threonine kinase 36 
ARMC4                 0.004   armadillo repeat containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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