Guide to the Human Genome
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Name: DNAJC28 Sequence: fasta or formatted (388aa) NCBI GI: 93352549
Description:

DnaJ (Hsp40) homolog, subfamily C, member 28

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt mRNA [388aa] DnaJ (Hsp40) homolog, subfamily C, member 28
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         16           2
 C cysteine            0.8          3           1
 D aspartate           4.4         17           1
 E glutamate           8.2         32           4
 F phenylalanine       4.1         16           1
 G glycine             3.9         15           1
 H histidine           2.8         11           1
 I isoleucine          8.2         32           2
 K lysine             11.1         43           3
 L leucine             6.7         26           2
 M methionine          3.1         12           2
 N asparagine          5.7         22           2
 P proline             3.6         14           1
 Q glutamine           7.0         27           2
 R arginine            6.4         25           1
 S serine              5.7         22           1
 T threonine           4.9         19           1
 V valine              4.6         18           1
 W tryptophan          1.0          4           1
 Y tyrosine            3.6         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 28 
DNAJC28               1.000   DnaJ (Hsp40) homolog, subfamily C, member 28 
DNAJB5                0.029   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJC16               0.029   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJC18               0.028   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJB5                0.028   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJC7                0.026   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJB9                0.026   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC7                0.026   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
SEC63                 0.026   SEC63-like protein 
DNAJB5                0.026   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJA2                0.024   DnaJ subfamily A member 2 
DNAJC10               0.024   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJB12               0.022   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.022   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJA3                0.022   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.022   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJC4                0.022   DnaJ (Hsp40) homolog, subfamily C, member 4 
DNAJC3                0.021   DnaJ (Hsp40) homolog, subfamily C, member 3 
DNAJB4                0.021   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJA4                0.021   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.020   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB1                0.018   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJA1                0.018   DnaJ (Hsp40) homolog, subfamily A, member 1 
ANKRD26               0.018   ankyrin repeat domain 26 
DNAJB14               0.018   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJB7                0.017   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB2                0.017   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.017   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJC17               0.017   DnaJ (Hsp40) homolog, subfamily C, member 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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