IKBKAP 27058

Name: IKBKAP	Sequence: fasta or formatted (1332aa)		NCBI GI: 38569394
Description: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein		Referenced in: NF-kappaB Pathway RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 80 2 C cysteine 2.2 29 2 D aspartate 5.4 72 2 E glutamate 7.4 98 3 F phenylalanine 4.1 54 2 G glycine 5.2 69 2 H histidine 3.1 41 2 I isoleucine 4.0 53 2 K lysine 5.9 79 2 L leucine 11.6 155 4 M methionine 2.0 26 2 N asparagine 4.0 53 2 P proline 4.4 58 3 Q glutamine 5.5 73 3 R arginine 4.1 54 2 S serine 8.0 107 3 T threonine 5.0 67 2 V valine 8.0 106 2 W tryptophan 1.7 22 1 Y tyrosine 2.7 36 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 inhibitor of kappa light polypeptide gene enhancer i... CEP110 0.005 centrosomal protein 110kDa IFT80 0.004 WD repeat domain 56 NHS 0.004 Nance-Horan syndrome protein isoform 1 NHS 0.004 Nance-Horan syndrome protein isoform 2 WDR87 0.003 NYD-SP11 protein C20orf20 0.003 MRG-binding protein DHX16 0.003 DEAH (Asp-Glu-Ala-His) box polypeptide 16 WDR19 0.003 WD repeat domain 19 ABCD3 0.003 ATP-binding cassette, sub-family D, member 3 isoform ... GOLGA4 0.003 golgi autoantigen, golgin subfamily a, 4 PCDHB16 0.003 protocadherin beta 16 precursor PNMAL2 0.003 PNMA-like 2 TRIM21 0.003 tripartite motif protein 21 RAI14 0.003 retinoic acid induced 14 isoform d RAI14 0.003 retinoic acid induced 14 isoform c RAI14 0.003 retinoic acid induced 14 isoform b RAI14 0.003 retinoic acid induced 14 isoform a RAI14 0.003 retinoic acid induced 14 isoform a RAI14 0.003 retinoic acid induced 14 isoform a KIF21B 0.003 kinesin family member 21B HEATR1 0.003 protein BAP28 TNNI2 0.003 fast-twitch skeletal muscle troponin I isoform 1 [Hom... TNNI2 0.003 fast-twitch skeletal muscle troponin I isoform 2 [H... TNNI2 0.003 fast-twitch skeletal muscle troponin I isoform 1 [H... EVC2 0.003 limbin C12orf60 0.003 hypothetical protein LOC144608 CCDC99 0.003 coiled-coil domain containing 99 APOB 0.003 apolipoprotein B precursor DST 0.003 dystonin isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.