Guide to the Human Genome
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Name: FKBP15 Sequence: fasta or formatted (1219aa) NCBI GI: 150010552
Description:

FK506 binding protein 15, 133kDa

Referenced in:

Peptidylprolyl Isomerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9        108           3
 C cysteine            0.7          9           1
 D aspartate           4.8         59           7
 E glutamate           9.6        117           5
 F phenylalanine       1.9         23           2
 G glycine             5.3         65           3
 H histidine           2.0         24           2
 I isoleucine          3.2         39           2
 K lysine              6.4         78           3
 L leucine             9.3        113           2
 M methionine          2.8         34           2
 N asparagine          3.2         39           2
 P proline             6.7         82           3
 Q glutamine           8.1         99           3
 R arginine            4.2         51           2
 S serine              9.9        121           3
 T threonine           5.3         65           2
 V valine              5.7         69           2
 W tryptophan          0.5          6           1
 Y tyrosine            1.5         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 15, 133kDa 
GOLGA6C               0.035   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6D               0.034   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6                0.033   golgi autoantigen, golgin subfamily a, 6 
GOLGA6B               0.033   golgi autoantigen, golgin subfamily a, 6B 
MYH13                 0.031   myosin, heavy polypeptide 13, skeletal muscle [Homo...
SYCP1                 0.028   synaptonemal complex protein 1 
EEA1                  0.027   early endosome antigen 1, 162kD 
LOC645202             0.027   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.026   golgi autoantigen, golgin subfamily a-like 
NEFM                  0.026   neurofilament, medium polypeptide 150kDa isoform 1 ...
LOC440243             0.026   PREDICTED: Putative golgin subfamily A member 6-lik...
TCHH                  0.026   trichohyalin 
CIT                   0.026   citron 
CLIP1                 0.025   restin isoform b 
CLIP1                 0.025   restin isoform a 
PLEC1                 0.025   plectin 1 isoform 11 
PLEC1                 0.025   plectin 1 isoform 10 
PLEC1                 0.025   plectin 1 isoform 8 
PLEC1                 0.025   plectin 1 isoform 7 
PLEC1                 0.025   plectin 1 isoform 6 
PLEC1                 0.025   plectin 1 isoform 3 
PLEC1                 0.025   plectin 1 isoform 2 
PLEC1                 0.025   plectin 1 isoform 1 
CCDC88A               0.025   coiled-coil domain containing 88A isoform 2 
CGNL1                 0.025   cingulin-like 1 
MYH10                 0.025   myosin, heavy polypeptide 10, non-muscle 
TPR                   0.025   nuclear pore complex-associated protein TPR 
MYH1                  0.025   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC88A               0.025   coiled-coil domain containing 88A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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