Guide to the Human Genome
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Name: LOC729196 Sequence: fasta or formatted (312aa) NCBI GI: 239755577
Description:

PREDICTED: similar to unc-93 homolog B1 (C. elegans)

Referenced in:

Muscle

Other entries for this name:
alt prot [503aa] PREDICTED: similar to unc-93 homolog B1 (C. elegans)
alt prot [529aa] PREDICTED: similar to unc-93 homolog B1 (C. elegans)
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         31           3
 C cysteine            1.6          5           1
 D aspartate           3.8         12           1
 E glutamate           6.7         21           3
 F phenylalanine       3.2         10           2
 G glycine             8.7         27           3
 H histidine           3.5         11           1
 I isoleucine          2.9          9           1
 K lysine              2.9          9           1
 L leucine            15.1         47           3
 M methionine          1.6          5           1
 N asparagine          1.6          5           2
 P proline             9.0         28           2
 Q glutamine           3.2         10           1
 R arginine            5.8         18           2
 S serine              6.4         20           2
 T threonine           3.5         11           1
 V valine              5.1         16           1
 W tryptophan          2.9          9           2
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to unc-93 homolog B1 (C. elegans... 
LOC729196             0.682   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
UNC93B1               0.632   unc-93 homolog B1 
LOC729196             0.592   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
LOC100287293          0.577   PREDICTED: hypothetical protein XP_002343924 
UNC93A                0.035   unc-93 homolog A isoform 1 
UNC93A                0.035   unc-93 homolog A isoform 2 
DMRT2                 0.024   doublesex and mab-3 related transcription factor 2 ...
DMRT2                 0.024   doublesex and mab-3 related transcription factor 2 is...
DMRT2                 0.024   doublesex and mab-3 related transcription factor 2 ...
C2orf55               0.023   hypothetical protein LOC343990 
MAP3K12               0.019   mitogen-activated protein kinase kinase kinase 12 [H...
EIF4G1                0.019   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.019   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.019   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.019   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.019   eukaryotic translation initiation factor 4 gamma, 1 ...
BAT3                  0.018   HLA-B associated transcript-3 isoform a 
SPNS2                 0.016   spinster homolog 2 
RPGR                  0.016   retinitis pigmentosa GTPase regulator isoform C [Hom...
BAT3                  0.016   HLA-B associated transcript-3 isoform b 
BAT3                  0.016   HLA-B associated transcript-3 isoform b 
BAT3                  0.016   HLA-B associated transcript-3 isoform b 
RP1L1                 0.016   retinitis pigmentosa 1-like 1 
FOXD1                 0.016   forkhead box D1 
LOC390595             0.014   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.014   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.014   PREDICTED: hypothetical protein 
ZCCHC2                0.014   zinc finger, CCHC domain containing 2 
LOC100289949          0.013   PREDICTED: hypothetical protein XP_002346877 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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