Guide to the Human Genome
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Name: DIDO1 Sequence: fasta or formatted (1189aa) NCBI GI: 71044477
Description:

death inducer-obliterator 1 isoform b

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [562aa] death inducer-obliterator 1 isoform a
alt prot [562aa] death inducer-obliterator 1 isoform a
alt prot [2240aa] death inducer-obliterator 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2        109           3
 C cysteine            2.1         25           2
 D aspartate           5.6         66           2
 E glutamate           8.1         96           4
 F phenylalanine       2.1         25           1
 G glycine             6.0         71           2
 H histidine           1.7         20           1
 I isoleucine          3.5         42           1
 K lysine              8.7        103           3
 L leucine             6.1         73           2
 M methionine          1.5         18           1
 N asparagine          2.5         30           3
 P proline             9.6        114           4
 Q glutamine           3.4         40           3
 R arginine            6.3         75           3
 S serine             10.9        130           3
 T threonine           4.9         58           2
 V valine              5.6         67           3
 W tryptophan          0.8         10           1
 Y tyrosine            1.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   death inducer-obliterator 1 isoform b 
DIDO1                 0.992   death inducer-obliterator 1 isoform c 
DIDO1                 0.447   death inducer-obliterator 1 isoform a 
DIDO1                 0.447   death inducer-obliterator 1 isoform a 
PHF3                  0.074   PHD finger protein 3 
SPOCD1                0.035   SPOC domain containing 1 
JHDM1D                0.021   jumonji C domain containing histone demethylase 1 ho...
CXXC1                 0.017   CXXC finger 1 (PHD domain) isoform 1 
CXXC1                 0.017   CXXC finger 1 (PHD domain) isoform 2 
PHF2                  0.017   PHD finger protein 2 
NEFH                  0.016   neurofilament, heavy polypeptide 200kDa 
PHF8                  0.016   PHD finger protein 8 
BPTF                  0.016   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.016   bromodomain PHD finger transcription factor isoform ...
TCEA3                 0.014   transcription elongation factor A (SII), 3 
TTN                   0.012   titin isoform N2-A 
PRG4                  0.012   proteoglycan 4 isoform B 
PRG4                  0.012   proteoglycan 4 isoform A 
LOC100289899          0.011   PREDICTED: hypothetical protein XP_002347041 
MLL5                  0.011   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.011   myeloid/lymphoid or mixed-lineage leukemia 5 
TCEA1                 0.011   transcription elongation factor A 1 isoform 1 
TCEA1                 0.011   transcription elongation factor A 1 isoform 2 
TRDN                  0.011   triadin 
MAP4                  0.011   microtubule-associated protein 4 isoform 5 
MAP4                  0.011   microtubule-associated protein 4 isoform 4 
MAP4                  0.011   microtubule-associated protein 4 isoform 2 
MAP4                  0.011   microtubule-associated protein 4 isoform 1 
TCEA2                 0.011   transcription elongation factor A protein 2 isoform ...
TCEA2                 0.011   transcription elongation factor A protein 2 isoform a...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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