TCEA1 29777

Name: TCEA1	Sequence: fasta or formatted (280aa)		NCBI GI: 45439355
Description: transcription elongation factor A 1 isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [301aa] transcription elongation factor A 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 21 3 C cysteine 2.9 8 1 D aspartate 6.4 18 2 E glutamate 9.3 26 3 F phenylalanine 2.1 6 1 G glycine 3.9 11 2 H histidine 0.4 1 1 I isoleucine 4.3 12 1 K lysine 10.7 30 3 L leucine 5.7 16 2 M methionine 3.9 11 1 N asparagine 6.1 17 1 P proline 3.2 9 2 Q glutamine 3.2 9 1 R arginine 7.1 20 1 S serine 8.2 23 2 T threonine 7.9 22 2 V valine 4.6 13 2 W tryptophan 0.7 2 1 Y tyrosine 1.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription elongation factor A 1 isoform 2 TCEA1 0.976 transcription elongation factor A 1 isoform 1 LOC100289899 0.925 PREDICTED: hypothetical protein XP_002347041 TCEA2 0.611 transcription elongation factor A protein 2 isoform a... TCEA2 0.589 transcription elongation factor A protein 2 isoform ... TCEA3 0.521 transcription elongation factor A (SII), 3 TCEANC 0.172 TFIIS central domain-containing protein 1 PHF3 0.092 PHD finger protein 3 DIDO1 0.050 death inducer-obliterator 1 isoform c DIDO1 0.050 death inducer-obliterator 1 isoform b SPOCD1 0.049 SPOC domain containing 1 POLR3K 0.045 DNA directed RNA polymerase III polypeptide K MED26 0.028 mediator complex subunit 26 GCC2 0.026 GRIP and coiled-coil domain-containing 2 C1orf83 0.024 hypothetical protein LOC127428 ZNF12 0.019 zinc finger protein 12 isoform b ZNF12 0.019 zinc finger protein 12 isoform a PHF14 0.019 PHD finger protein 14 isoform 2 PHF14 0.019 PHD finger protein 14 isoform 1 ZNF776 0.017 zinc finger protein 776 ZNF383 0.017 zinc finger protein 383 EPSTI1 0.017 epithelial stromal interaction 1 isoform 1 MAGEB6 0.017 melanoma antigen family B, 6 SFRS11 0.015 splicing factor, arginine/serine-rich 11 ZNF248 0.015 zinc finger protein 248 DNMT1 0.015 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... DNMT1 0.015 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... ATAD5 0.015 ATPase family, AAA domain containing 5 ZFC3H1 0.015 proline/serine-rich coiled-coil 2 KIAA1107 0.015 hypothetical protein LOC23285 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.