JHDM1D 37166

Name: JHDM1D	Sequence: fasta or formatted (941aa)		NCBI GI: 90093355
Description: jumonji C domain containing histone demethylase 1 homolog D		Referenced in: PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 49 5 C cysteine 2.4 23 1 D aspartate 5.4 51 2 E glutamate 7.4 70 3 F phenylalanine 3.9 37 2 G glycine 5.5 52 2 H histidine 3.2 30 2 I isoleucine 4.6 43 3 K lysine 7.7 72 2 L leucine 7.3 69 3 M methionine 2.3 22 1 N asparagine 4.0 38 1 P proline 5.8 55 6 Q glutamine 4.0 38 1 R arginine 6.0 56 2 S serine 9.8 92 3 T threonine 4.6 43 2 V valine 6.6 62 2 W tryptophan 1.4 13 1 Y tyrosine 2.8 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji C domain containing histone demethylase 1 ho... PHF8 0.313 PHD finger protein 8 PHF2 0.299 PHD finger protein 2 KDM2B 0.131 F-box and leucine-rich repeat protein 10 isoform a [... KDM2B 0.131 F-box and leucine-rich repeat protein 10 isoform b [... KDM2A 0.126 F-box and leucine-rich repeat protein 11 DIDO1 0.026 death inducer-obliterator 1 isoform c DIDO1 0.026 death inducer-obliterator 1 isoform b DIDO1 0.026 death inducer-obliterator 1 isoform a DIDO1 0.026 death inducer-obliterator 1 isoform a BPTF 0.022 bromodomain PHD finger transcription factor isoform ... BPTF 0.022 bromodomain PHD finger transcription factor isoform ... CXXC1 0.021 CXXC finger 1 (PHD domain) isoform 1 CXXC1 0.021 CXXC finger 1 (PHD domain) isoform 2 LOC100294340 0.013 PREDICTED: hypothetical protein XP_002344108 LOC646043 0.013 PREDICTED: hypothetical protein BOD1L 0.012 biorientation of chromosomes in cell division 1-like... SFRS4 0.011 splicing factor, arginine/serine-rich 4 TAF3 0.011 RNA polymerase II transcription factor TAFII140 [Ho... KDM5A 0.011 retinoblastoma binding protein 2 isoform 1 KDM5A 0.011 retinoblastoma binding protein 2 isoform 2 UBR7 0.011 ubiquitin protein ligase E3 component n-recognin 7 ... UBR7 0.011 ubiquitin protein ligase E3 component n-recognin 7 ... ARX 0.010 aristaless related homeobox PHF3 0.010 PHD finger protein 3 ZRANB2 0.009 zinc finger protein 265 isoform 1 ZRANB2 0.009 zinc finger protein 265 isoform 2 PHF23 0.009 PHD finger protein 23 MAZ 0.009 MYC-associated zinc finger protein isoform 2 MAZ 0.009 MYC-associated zinc finger protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.