Guide to the Human Genome
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Name: DIDO1 Sequence: fasta or formatted (562aa) NCBI GI: 18375617
Description:

death inducer-obliterator 1 isoform a

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt mRNA [562aa] death inducer-obliterator 1 isoform a
alt prot [1189aa] death inducer-obliterator 1 isoform b
alt prot [2240aa] death inducer-obliterator 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         48           3
 C cysteine            3.7         21           2
 D aspartate           6.2         35           2
 E glutamate           9.6         54           2
 F phenylalanine       1.4          8           1
 G glycine             7.8         44           2
 H histidine           1.6          9           1
 I isoleucine          3.9         22           1
 K lysine              9.1         51           3
 L leucine             5.5         31           2
 M methionine          1.2          7           1
 N asparagine          2.1         12           2
 P proline             8.2         46           4
 Q glutamine           4.3         24           3
 R arginine            6.8         38           3
 S serine              8.7         49           2
 T threonine           4.8         27           2
 V valine              4.1         23           3
 W tryptophan          1.1          6           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   death inducer-obliterator 1 isoform a 
DIDO1                 1.000   death inducer-obliterator 1 isoform a 
DIDO1                 0.935   death inducer-obliterator 1 isoform c 
DIDO1                 0.935   death inducer-obliterator 1 isoform b 
JHDM1D                0.044   jumonji C domain containing histone demethylase 1 ho...
PHF3                  0.042   PHD finger protein 3 
CXXC1                 0.036   CXXC finger 1 (PHD domain) isoform 1 
CXXC1                 0.036   CXXC finger 1 (PHD domain) isoform 2 
PHF2                  0.035   PHD finger protein 2 
PHF8                  0.035   PHD finger protein 8 
BPTF                  0.034   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.034   bromodomain PHD finger transcription factor isoform ...
MLL5                  0.024   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.024   myeloid/lymphoid or mixed-lineage leukemia 5 
RPGR                  0.021   retinitis pigmentosa GTPase regulator isoform C [Hom...
PHF20                 0.020   PHD finger protein 20 
ING3                  0.019   inhibitor of growth family, member 3 isoform 1 [Homo...
TRDN                  0.018   triadin 
LOC100294340          0.017   PREDICTED: hypothetical protein XP_002344108 
KDM5A                 0.017   retinoblastoma binding protein 2 isoform 1 
KDM5A                 0.017   retinoblastoma binding protein 2 isoform 2 
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 1 [...
NASP                  0.017   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.017   nuclear autoantigenic sperm protein isoform 1 
PHF23                 0.016   PHD finger protein 23 
LOC100133599          0.016   PREDICTED: hypothetical protein 
LOC646043             0.016   PREDICTED: hypothetical protein 
TNIK                  0.016   TRAF2 and NCK interacting kinase isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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