Search of human proteins with 71037389

Search of human proteins with 71037389

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71037389 SRY (sex determining region Y)-box 6 isoform 2
[Homo sapiens]
         (808 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...  1612   0.0  
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...  1600   0.0  
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...  1483   0.0  
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...  1483   0.0  
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...   838   0.0  
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...   838   0.0  
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...   437   e-122
gi|41406089 SRY-box 13 [Homo sapiens]                                 237   4e-62
gi|11967991 SRY-box 17 [Homo sapiens]                                 109   1e-23
gi|13899269 SRY-box 7 [Homo sapiens]                                  104   3e-22
gi|8924248 SRY-box 18 [Homo sapiens]                                  104   4e-22
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]        103   5e-22
gi|4507161 SRY-box 11 [Homo sapiens]                                  103   8e-22
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]       102   2e-21
gi|4759162 SRY-box 14 [Homo sapiens]                                  100   4e-21
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]      100   5e-21
gi|28195386 sex-determining region Y-box 2 [Homo sapiens]             100   7e-21
gi|5902108 SRY-box 21 [Homo sapiens]                                   99   1e-20
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]        99   2e-20
gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]        98   3e-20
gi|4557853 transcription factor SOX9 [Homo sapiens]                    97   5e-20
gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]        97   5e-20
gi|4507225 sex determining region Y [Homo sapiens]                     97   8e-20
gi|5902106 SRY-box 15 [Homo sapiens]                                   96   2e-19
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    88   4e-17
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    83   9e-16
gi|112421108 capicua homolog [Homo sapiens]                            68   3e-11
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]    66   1e-10
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]    66   1e-10
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]    66   1e-10

>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 1612 bits (4174), Expect = 0.0
 Identities = 808/808 (100%), Positives = 808/808 (100%)

Query: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60
           MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
Sbjct: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60

Query: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120
           STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
Sbjct: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120

Query: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180
           ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
Sbjct: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180

Query: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240
           PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
Sbjct: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240

Query: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300
           QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
Sbjct: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300

Query: 301 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 360
           DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS
Sbjct: 301 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 360

Query: 361 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 420
           YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
Sbjct: 361 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 420

Query: 421 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI 480
           AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI
Sbjct: 421 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI 480

Query: 481 LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE 540
           LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE
Sbjct: 481 LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE 540

Query: 541 KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSEPH 600
           KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSEPH
Sbjct: 541 KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSEPH 600

Query: 601 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 660
           IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI
Sbjct: 601 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 660

Query: 661 HLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTG 720
           HLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTG
Sbjct: 661 HLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTG 720

Query: 721 VVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDE 780
           VVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDE
Sbjct: 721 VVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDE 780

Query: 781 MEMYDDYEDDPKSDYSSENEAPEAVSAN 808
           MEMYDDYEDDPKSDYSSENEAPEAVSAN
Sbjct: 781 MEMYDDYEDDPKSDYSSENEAPEAVSAN 808


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 1600 bits (4143), Expect = 0.0
 Identities = 808/828 (97%), Positives = 808/828 (97%), Gaps = 20/828 (2%)

Query: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60
           MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
Sbjct: 14  MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 73

Query: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120
           STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
Sbjct: 74  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 133

Query: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180
           ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
Sbjct: 134 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 193

Query: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240
           PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
Sbjct: 194 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 253

Query: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300
           QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
Sbjct: 254 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 313

Query: 301 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 360
           DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS
Sbjct: 314 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 373

Query: 361 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 420
           YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
Sbjct: 374 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 433

Query: 421 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI 480
           AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI
Sbjct: 434 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI 493

Query: 481 LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE 540
           LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE
Sbjct: 494 LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE 553

Query: 541 KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAE--------------------GGA 580
           KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAE                    GGA
Sbjct: 554 KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGA 613

Query: 581 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 640
           TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK
Sbjct: 614 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 673

Query: 641 SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE 700
           SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE
Sbjct: 674 SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE 733

Query: 701 MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY 760
           MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY
Sbjct: 734 MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY 793

Query: 761 GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 808
           GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
Sbjct: 794 GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 841


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 1483 bits (3838), Expect = 0.0
 Identities = 767/842 (91%), Positives = 767/842 (91%), Gaps = 75/842 (8%)

Query: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60
           MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
Sbjct: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60

Query: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120
           STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
Sbjct: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120

Query: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180
           ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
Sbjct: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180

Query: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240
           PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
Sbjct: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240

Query: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300
           QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
Sbjct: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300

Query: 301 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 360
           DNYPVQFIPSTMAAAAASGLSPLQLQ                                  
Sbjct: 301 DNYPVQFIPSTMAAAAASGLSPLQLQ---------------------------------- 326

Query: 361 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 420
                  QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
Sbjct: 327 -------QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 379

Query: 421 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL-- 478
           AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL  
Sbjct: 380 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLGK 439

Query: 479 ------------DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL 526
                       DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL
Sbjct: 440 WKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL 499

Query: 527 SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEG-------- 578
           SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEG        
Sbjct: 500 SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSA 559

Query: 579 ------------GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM 626
                       GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM
Sbjct: 560 AKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM 619

Query: 627 HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR 686
           HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR
Sbjct: 620 HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR 679

Query: 687 IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS 746
           IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS
Sbjct: 680 IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS 739

Query: 747 ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS 806
           ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS
Sbjct: 740 ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS 799

Query: 807 AN 808
           AN
Sbjct: 800 AN 801


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 1483 bits (3838), Expect = 0.0
 Identities = 767/842 (91%), Positives = 767/842 (91%), Gaps = 75/842 (8%)

Query: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60
           MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
Sbjct: 4   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 63

Query: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120
           STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
Sbjct: 64  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 123

Query: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180
           ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
Sbjct: 124 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 183

Query: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240
           PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
Sbjct: 184 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 243

Query: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300
           QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
Sbjct: 244 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 303

Query: 301 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 360
           DNYPVQFIPSTMAAAAASGLSPLQLQ                                  
Sbjct: 304 DNYPVQFIPSTMAAAAASGLSPLQLQ---------------------------------- 329

Query: 361 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 420
                  QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
Sbjct: 330 -------QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 382

Query: 421 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL-- 478
           AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL  
Sbjct: 383 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLGK 442

Query: 479 ------------DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL 526
                       DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL
Sbjct: 443 WKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL 502

Query: 527 SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEG-------- 578
           SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEG        
Sbjct: 503 SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSA 562

Query: 579 ------------GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM 626
                       GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM
Sbjct: 563 AKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM 622

Query: 627 HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR 686
           HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR
Sbjct: 623 HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR 682

Query: 687 IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS 746
           IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS
Sbjct: 683 IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS 742

Query: 747 ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS 806
           ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS
Sbjct: 743 ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS 802

Query: 807 AN 808
           AN
Sbjct: 803 AN 804


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score =  838 bits (2166), Expect = 0.0
 Identities = 480/818 (58%), Positives = 571/818 (69%), Gaps = 78/818 (9%)

Query: 1   MSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELPT 58
           MSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE   
Sbjct: 1   MSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQP 56

Query: 59  LVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVTF 117
           +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S   
Sbjct: 57  VSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTAL 116

Query: 118 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 177
           GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GEI
Sbjct: 117 GTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GEI 175

Query: 178 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 237
           KGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQI
Sbjct: 176 KGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQI 235

Query: 238 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 297
           ARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +Y
Sbjct: 236 ARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFSY 293

Query: 298 KPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTF 353
           K G  D YPVQ IP+TMAAAAA+  GL PLQLQ                           
Sbjct: 294 KAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQ--------------------------- 326

Query: 354 EHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPV 413
                         QLYAAQLA+MQVSPG K+P  PQ  N    VSPT I  +K   SP 
Sbjct: 327 --------------QLYAAQLAAMQVSPGGKLPGIPQG-NLGAAVSPTSIHTDKSTNSPP 371

Query: 414 TQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLG 473
            + KDE A QPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +     
Sbjct: 372 PKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPSA 429

Query: 474 RGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMG 533
           R S++  L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++G
Sbjct: 430 RVSTIGYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSLG 475

Query: 534 LNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARG 593
           LN+CR EKE+T  E+L  QL  K NE+GK    ++D     D++G A V+E+R+YR++RG
Sbjct: 476 LNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRG 535

Query: 594 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 653
           R S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK+M+N EKQPYYEE
Sbjct: 536 RGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEE 595

Query: 654 QARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQI 713
           QARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RRQEMRQ+F VGQQ QI
Sbjct: 596 QARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQI 655

Query: 714 PITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGN- 772
           PI T  GVVYPGAI MA   PSP + S+ SS S+SPEP +PVIQSTYG+K +   +    
Sbjct: 656 PIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEI 713

Query: 773 --EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 808
             E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 714 QAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 750


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score =  838 bits (2166), Expect = 0.0
 Identities = 480/818 (58%), Positives = 571/818 (69%), Gaps = 78/818 (9%)

Query: 1   MSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELPT 58
           MSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE   
Sbjct: 14  MSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQP 69

Query: 59  LVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVTF 117
           +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S   
Sbjct: 70  VSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTAL 129

Query: 118 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 177
           GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GEI
Sbjct: 130 GTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GEI 188

Query: 178 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 237
           KGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQI
Sbjct: 189 KGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQI 248

Query: 238 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 297
           ARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +Y
Sbjct: 249 ARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFSY 306

Query: 298 KPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTF 353
           K G  D YPVQ IP+TMAAAAA+  GL PLQLQ                           
Sbjct: 307 KAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQ--------------------------- 339

Query: 354 EHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPV 413
                         QLYAAQLA+MQVSPG K+P  PQ  N    VSPT I  +K   SP 
Sbjct: 340 --------------QLYAAQLAAMQVSPGGKLPGIPQG-NLGAAVSPTSIHTDKSTNSPP 384

Query: 414 TQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLG 473
            + KDE A QPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +     
Sbjct: 385 PKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPSA 442

Query: 474 RGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMG 533
           R S++  L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++G
Sbjct: 443 RVSTIGYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSLG 488

Query: 534 LNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARG 593
           LN+CR EKE+T  E+L  QL  K NE+GK    ++D     D++G A V+E+R+YR++RG
Sbjct: 489 LNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRG 548

Query: 594 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 653
           R S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK+M+N EKQPYYEE
Sbjct: 549 RGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEE 608

Query: 654 QARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQI 713
           QARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RRQEMRQ+F VGQQ QI
Sbjct: 609 QARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQI 668

Query: 714 PITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGN- 772
           PI T  GVVYPGAI MA   PSP + S+ SS S+SPEP +PVIQSTYG+K +   +    
Sbjct: 669 PIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEI 726

Query: 773 --EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 808
             E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 727 QAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 763


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score =  437 bits (1125), Expect = e-122
 Identities = 234/393 (59%), Positives = 289/393 (73%), Gaps = 21/393 (5%)

Query: 419 EAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL 478
           +  AQPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +     R S++
Sbjct: 3   DEVAQPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTI 61

Query: 479 DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCR 538
             L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++GLN+CR
Sbjct: 62  GYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSLGLNNCR 107

Query: 539 NEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSE 598
            EKE+T  E+L  QL  K NE+GK    ++D     D++G A V+E+R+YR++RGR S+E
Sbjct: 108 TEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNE 167

Query: 599 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS 658
           PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK+M+N EKQPYYEEQARLS
Sbjct: 168 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS 227

Query: 659 KIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTG 718
           K HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RRQEMRQ+F VGQQ QIPI T 
Sbjct: 228 KQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIAT- 286

Query: 719 TGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGN---EMI 775
            GVVYPGAI MA   PSP + S+ SS S+SPEP +PVIQSTYG+K +   +      E I
Sbjct: 287 AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDI 345

Query: 776 NGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 808
           NGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 346 NGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 377


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score =  237 bits (604), Expect = 4e-62
 Identities = 159/393 (40%), Positives = 214/393 (54%), Gaps = 58/393 (14%)

Query: 407 KRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPS 466
           KR  +  T    +  +QPLNL+++PK  E   + +SP+             L   S +P 
Sbjct: 275 KRPGAMATHHPLQEPSQPLNLTAKPKAPELPNTSSSPS-------------LKMSSCVPR 321

Query: 467 PIGGSLGRGSSLDILSSLNSPAL--FGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDG 524
           P       G + D+ SS  S  L   G+ D V KAIQ+AR++               +DG
Sbjct: 322 PPSHG---GPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHS--------HSGALDG 370

Query: 525 KLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAE 584
             ++     L S  +   + R E            DG + P        E+A     +  
Sbjct: 371 SPNTPFRKDLISLDSSPAKERLE------------DGCVHP-------LEEAMLSCDMDG 411

Query: 585 ARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSN 644
           +R + ++R  +    HIKRPMNAFMVWAKDERRKILQAFPDMHNS+ISKILGSRWKSM+N
Sbjct: 412 SRHFPESRNSS----HIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTN 467

Query: 645 QEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQF 704
           QEKQPYYEEQARLS+ HLEKYP+YKYKPRPKRTCIV+GK+LR+GEYK LMR+RRQ+ RQ 
Sbjct: 468 QEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQS 527

Query: 705 FTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKT 764
           + +  Q      + + V+YP A  M    P  +          S +P++PVI +T  ++ 
Sbjct: 528 YVIPPQAGQVQMSSSDVLYPRAAGMPLAQPLVE-----HYVPRSLDPNMPVIVNTCSLRE 582

Query: 765 DGGSLAGNEMINGEDEMEMY---DDYEDDPKSD 794
           +G        +  + EM  Y   +D E + KSD
Sbjct: 583 EGEGTDDRHSV-ADGEMYRYSEDEDSEGEEKSD 614



 Score =  162 bits (411), Expect = 9e-40
 Identities = 99/196 (50%), Positives = 128/196 (65%), Gaps = 6/196 (3%)

Query: 118 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 177
           G+PE ++  +++     ++K   +  R  +E    +EKLLS DWKE+    N+ E   ++
Sbjct: 82  GSPEPKRPGVSEAASGSQEKL--DFNRNLKEVVPAIEKLLSSDWKERFLGRNSMEAK-DV 138

Query: 178 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 237
           KGT ESLAEKE QL  MI QL +LR+QLL AH EQK +AA   EKQ+QQM+LARQQQEQI
Sbjct: 139 KGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQI 198

Query: 238 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 297
           A+QQQQL+QQQHKINLLQQQIQ Q +MP +MIP FP   + L     +Q      P I  
Sbjct: 199 AKQQQQLIQQQHKINLLQQQIQ-QVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQP-IPC 256

Query: 298 KPGDNYPVQFIPSTMA 313
           KP + YP+Q + S  A
Sbjct: 257 KPVE-YPLQLLHSPPA 271


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score =  109 bits (272), Expect = 1e-23
 Identities = 48/98 (48%), Positives = 68/98 (69%)

Query: 579 GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 638
           G   A +     A GRA  E  I+RPMNAFMVWAKDER+++ Q  PD+HN+ +SK+LG  
Sbjct: 46  GEAPANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKS 105

Query: 639 WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKR 676
           WK+++  EK+P+ EE  RL   H++ +PNYKY+PR ++
Sbjct: 106 WKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRK 143


>gi|13899269 SRY-box 7 [Homo sapiens]
          Length = 388

 Score =  104 bits (260), Expect = 3e-22
 Identities = 44/84 (52%), Positives = 62/84 (73%)

Query: 593 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 652
           G   SE  I+RPMNAFMVWAKDER+++    PD+HN+ +SK+LG  WK+++  +K+PY +
Sbjct: 37  GDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVD 96

Query: 653 EQARLSKIHLEKYPNYKYKPRPKR 676
           E  RL   H++ YPNYKY+PR K+
Sbjct: 97  EAERLRLQHMQDYPNYKYRPRRKK 120


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score =  104 bits (259), Expect = 4e-22
 Identities = 45/83 (54%), Positives = 62/83 (74%)

Query: 594 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 653
           +A+ E  I+RPMNAFMVWAKDER+++ Q  PD+HN+ +SK+LG  WK ++  EK+P+ EE
Sbjct: 78  QAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEE 137

Query: 654 QARLSKIHLEKYPNYKYKPRPKR 676
             RL   HL  +PNYKY+PR K+
Sbjct: 138 AERLRVQHLRDHPNYKYRPRRKK 160


>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
          Length = 474

 Score =  103 bits (258), Expect = 5e-22
 Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 6/130 (4%)

Query: 547 ENLGPQLTGKSNEDGK-LGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSEPHIKRPM 605
           EN    L G+S++ G  L  G+     P     G+T +      D     +   HIKRPM
Sbjct: 9   ENTEALLAGESSDSGAGLELGIASSPTP-----GSTASTGGKADDPSWCKTPSGHIKRPM 63

Query: 606 NAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKY 665
           NAFMVW++ ERRKI++  PDMHN+ ISK LG RWK + + +K P+  E  RL   H+  Y
Sbjct: 64  NAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADY 123

Query: 666 PNYKYKPRPK 675
           P+YKY+PR K
Sbjct: 124 PDYKYRPRKK 133


>gi|4507161 SRY-box 11 [Homo sapiens]
          Length = 441

 Score =  103 bits (256), Expect = 8e-22
 Identities = 46/76 (60%), Positives = 56/76 (73%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           HIKRPMNAFMVW+K ERRKI++  PDMHN+ ISK LG RWK + + EK P+  E  RL  
Sbjct: 48  HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 107

Query: 660 IHLEKYPNYKYKPRPK 675
            H+  YP+YKY+PR K
Sbjct: 108 KHMADYPDYKYRPRKK 123


>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
          Length = 391

 Score =  102 bits (253), Expect = 2e-21
 Identities = 44/92 (47%), Positives = 65/92 (70%)

Query: 593 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 652
           G  +++  +KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK MS  EK+P+ +
Sbjct: 43  GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 102

Query: 653 EQARLSKIHLEKYPNYKYKPRPKRTCIVDGKK 684
           E  RL  +H++++P+YKY+PR K   ++   K
Sbjct: 103 EAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK 134


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score =  100 bits (250), Expect = 4e-21
 Identities = 44/76 (57%), Positives = 58/76 (76%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           HIKRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK +S  EK+PY +E  RL  
Sbjct: 7   HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA 66

Query: 660 IHLEKYPNYKYKPRPK 675
            H++++P+YKY+PR K
Sbjct: 67  QHMKEHPDYKYRPRRK 82


>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
          Length = 315

 Score =  100 bits (249), Expect = 5e-21
 Identities = 44/76 (57%), Positives = 56/76 (73%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           HIKRPMNAFMVW++ ERRKI+  +PDMHN+ ISK LG RW+ + + EK P+  E  RL  
Sbjct: 39  HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 98

Query: 660 IHLEKYPNYKYKPRPK 675
            H+  YP+YKY+PR K
Sbjct: 99  KHMADYPDYKYRPRKK 114


>gi|28195386 sex-determining region Y-box 2 [Homo sapiens]
          Length = 317

 Score =  100 bits (248), Expect = 7e-21
 Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 6/108 (5%)

Query: 578 GGATVAEARVYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 636
           GG + A A     A G   + P  +KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG
Sbjct: 22  GGNSTAAA-----AGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 76

Query: 637 SRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKK 684
           + WK +S  EK+P+ +E  RL  +H++++P+YKY+PR K   ++   K
Sbjct: 77  AEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK 124


>gi|5902108 SRY-box 21 [Homo sapiens]
          Length = 276

 Score = 99.4 bits (246), Expect = 1e-20
 Identities = 41/76 (53%), Positives = 59/76 (77%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           H+KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK ++  EK+P+ +E  RL  
Sbjct: 7   HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRA 66

Query: 660 IHLEKYPNYKYKPRPK 675
           +H++++P+YKY+PR K
Sbjct: 67  MHMKEHPDYKYRPRRK 82


>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
          Length = 446

 Score = 99.0 bits (245), Expect = 2e-20
 Identities = 48/131 (36%), Positives = 74/131 (56%)

Query: 554 TGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAK 613
           T  +   G   PG    +    A G  +   +       G  + +  +KRPMNAFMVW++
Sbjct: 92  TQAAGTGGPAAPGGAGKSSANAAGGANSGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSR 151

Query: 614 DERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPR 673
            +RRK+    P MHNS ISK LG+ WK +++ EK+P+ +E  RL  +H+++YP+YKY+PR
Sbjct: 152 GQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPR 211

Query: 674 PKRTCIVDGKK 684
            K   ++   K
Sbjct: 212 RKTKTLLKKDK 222


>gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]
          Length = 446

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 40/85 (47%), Positives = 60/85 (70%)

Query: 593 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 652
           G   ++PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ +S  EK+P+ E
Sbjct: 94  GALKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVE 153

Query: 653 EQARLSKIHLEKYPNYKYKPRPKRT 677
           E  RL   H + +P+YKY+PR +++
Sbjct: 154 EAERLRVQHKKDHPDYKYQPRRRKS 178


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score = 97.4 bits (241), Expect = 5e-20
 Identities = 39/85 (45%), Positives = 61/85 (71%)

Query: 593 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 652
           G + ++PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ ++  EK+P+ E
Sbjct: 97  GSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVE 156

Query: 653 EQARLSKIHLEKYPNYKYKPRPKRT 677
           E  RL   H + +P+YKY+PR +++
Sbjct: 157 EAERLRVQHKKDHPDYKYQPRRRKS 181


>gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]
          Length = 466

 Score = 97.4 bits (241), Expect = 5e-20
 Identities = 39/84 (46%), Positives = 60/84 (71%)

Query: 593 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 652
           G + S+PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ ++  +K+P+ E
Sbjct: 96  GASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 155

Query: 653 EQARLSKIHLEKYPNYKYKPRPKR 676
           E  RL   H + +P+YKY+PR ++
Sbjct: 156 EAERLRMQHKKDHPDYKYQPRRRK 179


>gi|4507225 sex determining region Y [Homo sapiens]
          Length = 204

 Score = 96.7 bits (239), Expect = 8e-20
 Identities = 41/82 (50%), Positives = 59/82 (71%)

Query: 594 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 653
           + + +  +KRPMNAF+VW++D+RRK+    P M NS ISK LG +WK ++  EK P+++E
Sbjct: 53  KGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQE 112

Query: 654 QARLSKIHLEKYPNYKYKPRPK 675
             +L  +H EKYPNYKY+PR K
Sbjct: 113 AQKLQAMHREKYPNYKYRPRRK 134


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score = 95.5 bits (236), Expect = 2e-19
 Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 8/103 (7%)

Query: 573 PEDAEGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS 632
           P++ EG  + A       A G    E  +KRPMNAFMVW+  +RR++ Q  P MHNS IS
Sbjct: 29  PQEREGAGSPA-------APGTLPLEK-VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEIS 80

Query: 633 KILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPK 675
           K LG++WK +   EK+P+ EE  RL   HL  YP+YKY+PR K
Sbjct: 81  KRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRK 123


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           H+KRPMNAFMVWA+  R  + +A P  +N+ IS  LG  W  +S ++K+PYY+E  ++ +
Sbjct: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395

Query: 660 IHLEKYPNYKYKPRP--KRTCIVDGKKLRIGEYKQLMRSRRQEM-----RQFFTVGQQPQ 712
            H E++P + Y+PRP  ++   +    +  G  + ++ +    +       +  V    Q
Sbjct: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455

Query: 713 IPITTGTGVVYPG--AITMATTTPSPQMTSDCSSTSAS----PEPSLPVIQSTYGMKTDG 766
            PIT   G   P     T A  +PSP      S +SA+     +PSLPV  +    +  G
Sbjct: 456 NPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTG 515

Query: 767 GSLAGNEMINGE 778
            S      ++ E
Sbjct: 516 PSQTDTHQLHSE 527


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 83.2 bits (204), Expect = 9e-16
 Identities = 34/75 (45%), Positives = 52/75 (69%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           H+KRPMNAFMVWA+  R  + +A P  +N+ IS  LG  W  +S ++K+PYY+E  ++ +
Sbjct: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395

Query: 660 IHLEKYPNYKYKPRP 674
            H E++P + Y+PRP
Sbjct: 396 KHREEFPGWVYQPRP 410


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 29/89 (32%), Positives = 54/89 (60%)

Query: 600 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 659
           HI+RPMNAFM+++K  R  + Q  P+  N  +SKILG  W ++  +EKQ Y++   ++ +
Sbjct: 199 HIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKE 258

Query: 660 IHLEKYPNYKYKPRPKRTCIVDGKKLRIG 688
            H + +P++K+  + ++    + K   +G
Sbjct: 259 AHFKAHPDWKWCNKDRKKSSSEAKPTSLG 287



 Score = 30.4 bits (67), Expect = 6.9
 Identities = 54/208 (25%), Positives = 69/208 (33%), Gaps = 48/208 (23%)

Query: 290  LFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRN 349
            +  PG   K G    VQ+I  T+         P QLQ      P    +    S      
Sbjct: 810  ILQPGALGKAGGITQVQYILPTL---------PQQLQVAPAPAPAPGTKAAAPSGPAPTT 860

Query: 350  LDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAK-MPSTPQ-PPNTAGTVSPT------ 401
               F    G S N K         LA+   +PG   + S P  PP  A +VSP       
Sbjct: 861  SIRFTLPPGTSTNGKV--------LAATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPPG 912

Query: 402  GIKNEKRG------TSPVTQVKDEAAAQPLNLSSRP-----------------KTAEPVK 438
            G      G       +P   V+   A QPL L S P                  T  PV 
Sbjct: 913  GSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVPVS 972

Query: 439  SPTSPTQNLFPASKTSPVNLPNKSSIPS 466
            +P+     L PA+   P + P K  +PS
Sbjct: 973  TPSGLVPPLSPATLPGPTSQPQKVLLPS 1000


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 598 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 657
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 347 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 406

Query: 658 SKIHLEKYP------NYKYKPRPKR 676
            ++H++ YP      NY  K + KR
Sbjct: 407 RQLHMQLYPGWSARDNYGKKKKRKR 431


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 598 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 657
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383

Query: 658 SKIHLEKYP------NYKYKPRPKR 676
            ++H++ YP      NY  K + KR
Sbjct: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408


>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 598 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 657
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383

Query: 658 SKIHLEKYP------NYKYKPRPKR 676
            ++H++ YP      NY  K + KR
Sbjct: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.126    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,513,079
Number of Sequences: 37866
Number of extensions: 1716975
Number of successful extensions: 16003
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 645
Number of HSP's that attempted gapping in prelim test: 8968
Number of HSP's gapped (non-prelim): 4601
length of query: 808
length of database: 18,247,518
effective HSP length: 110
effective length of query: 698
effective length of database: 14,082,258
effective search space: 9829416084
effective search space used: 9829416084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.