Guide to the Human Genome
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Name: CENPI Sequence: fasta or formatted (756aa) NCBI GI: 41352697
Description:

centromere protein I

Referenced in:

Centromere Proteins
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         33           2
 C cysteine            2.5         19           2
 D aspartate           3.2         24           2
 E glutamate           5.3         40           2
 F phenylalanine       5.6         42           3
 G glycine             4.2         32           2
 H histidine           2.4         18           2
 I isoleucine          4.6         35           2
 K lysine              7.7         58           2
 L leucine            13.6        103           3
 M methionine          2.0         15           1
 N asparagine          6.1         46           2
 P proline             4.4         33           2
 Q glutamine           4.8         36           1
 R arginine            3.2         24           1
 S serine              9.9         75           3
 T threonine           4.0         30           2
 V valine              6.1         46           2
 W tryptophan          2.1         16           1
 Y tyrosine            4.1         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centromere protein I 
PRKDC                 0.006   protein kinase, DNA-activated, catalytic polypeptid...
PRKDC                 0.006   protein kinase, DNA-activated, catalytic polypeptide...
LOC731751             0.006   PREDICTED: similar to protein kinase, DNA-activated...
FPGS                  0.005   folylpolyglutamate synthase isoform a precursor [Hom...
LOC651959             0.005   PREDICTED: FSHD region gene 2-like 
LOC651959             0.005   PREDICTED: FSHD region gene 2-like 
FRG2C                 0.005   FSHD region gene 2 family, member C 
MFSD6                 0.003   major facilitator superfamily domain containing 6 [...
ABCA13                0.003   ATP binding cassette, sub-family A (ABC1), member 13...
CCNF                  0.003   cyclin F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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