Guide to the Human Genome
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Name: FASTKD1 Sequence: fasta or formatted (847aa) NCBI GI: 188497683
Description:

FAST kinase domains 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         43           1
 C cysteine            2.1         18           1
 D aspartate           4.7         40           2
 E glutamate           6.4         54           2
 F phenylalanine       5.9         50           2
 G glycine             3.5         30           2
 H histidine           3.0         25           1
 I isoleucine          6.6         56           2
 K lysine              6.5         55           3
 L leucine            14.5        123           3
 M methionine          3.1         26           1
 N asparagine          4.4         37           2
 P proline             4.3         36           2
 Q glutamine           5.0         42           3
 R arginine            4.8         41           2
 S serine              7.7         65           2
 T threonine           3.8         32           2
 V valine              5.4         46           1
 W tryptophan          0.8          7           1
 Y tyrosine            2.5         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FAST kinase domains 1 
LOC100131573          0.230   PREDICTED: hypothetical protein 
LOC100131573          0.230   PREDICTED: hypothetical protein 
FASTKD3               0.043   FAST kinase domains 3 
FASTKD5               0.027   FAST kinase domains 5 
TBRG4                 0.027   cell cycle progression 2 protein isoform 1 
TBRG4                 0.027   cell cycle progression 2 protein isoform 2 
TBRG4                 0.027   cell cycle progression 2 protein isoform 2 
FASTKD2               0.019   FAST kinase domains 2 
FASTKD2               0.019   FAST kinase domains 2 
FASTKD2               0.019   FAST kinase domains 2 
FASTK                 0.010   Fas-activated serine/threonine kinase isoform 1 [Homo...
FASTK                 0.010   Fas-activated serine/threonine kinase isoform 4 [Hom...
PRKDC                 0.006   protein kinase, DNA-activated, catalytic polypeptid...
PRKDC                 0.006   protein kinase, DNA-activated, catalytic polypeptide...
LOC731751             0.006   PREDICTED: similar to protein kinase, DNA-activated...
TDRD7                 0.005   tudor domain containing 7 
LRRC19                0.005   leucine rich repeat containing 19 
LGR4                  0.004   leucine-rich repeat-containing G protein-coupled re...
C6orf138              0.004   hypothetical protein LOC442213 
KCTD21                0.004   potassium channel tetramerisation domain containing ...
LRIG2                 0.004   leucine-rich repeats and immunoglobulin-like domains ...
LOC100291556          0.003   PREDICTED: hypothetical protein XP_002345990 
LOC100290905          0.003   PREDICTED: hypothetical protein XP_002346842 
LOC100287784          0.003   PREDICTED: hypothetical protein XP_002342728 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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