SERGEF 34901

Name: SERGEF	Sequence: fasta or formatted (458aa)		NCBI GI: 6912330
Description: deafness locus associated putative guanine nucleotide exchange factor		Referenced in: Ran and Rag
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 42 4 C cysteine 4.1 19 1 D aspartate 3.7 17 1 E glutamate 5.9 27 1 F phenylalanine 3.1 14 2 G glycine 11.4 52 4 H histidine 3.3 15 1 I isoleucine 2.6 12 2 K lysine 4.4 20 1 L leucine 9.2 42 2 M methionine 1.5 7 1 N asparagine 3.3 15 1 P proline 5.7 26 2 Q glutamine 5.2 24 2 R arginine 3.5 16 2 S serine 8.1 37 3 T threonine 5.5 25 1 V valine 6.1 28 2 W tryptophan 2.8 13 1 Y tyrosine 1.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 deafness locus associated putative guanine nucleotide... HERC3 0.131 hect domain and RLD 3 HERC4 0.128 hect domain and RLD 4 isoform b HERC4 0.128 hect domain and RLD 4 isoform a HERC2 0.116 hect domain and RLD 2 HERC1 0.104 guanine nucleotide exchange factor p532 RPGR 0.100 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.100 retinitis pigmentosa GTPase regulator isoform C [Hom... HERC6 0.085 hect domain and RLD 6 RCBTB2 0.084 regulator of chromosome condensation and BTB domain c... RCBTB1 0.083 regulator of chromosome condensation (RCC1) and BTB ... RCC1 0.077 regulator of chromosome condensation 1 isoform b [H... RCC1 0.077 regulator of chromosome condensation 1 isoform a [H... RCC1 0.077 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.077 regulator of chromosome condensation 1 SNHG3-RCC1 0.077 regulator of chromosome condensation 1 SNHG3-RCC1 0.077 regulator of chromosome condensation 1 HERC5 0.073 hect domain and RLD 5 RCC2 0.069 regulator of chromosome condensation 2 RCC2 0.069 regulator of chromosome condensation 2 NEK9 0.065 NIMA-related kinase 9 NEK8 0.064 NIMA-related kinase 8 WBSCR16 0.059 Williams-Beuren syndrome chromosome region 16 LOC390561 0.058 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.056 PREDICTED: similar to hect domain and RLD 2 LOC653375 0.055 PREDICTED: RCC1-like G exchanging factor-like [Homo... LOC653375 0.055 PREDICTED: RCC1-like G exchanging factor-like [Homo... LOC100290629 0.052 PREDICTED: hypothetical protein XP_002347563 IBTK 0.051 inhibitor of Bruton's tyrosine kinase RCCD1 0.045 RCC1 domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.