LOC100290629 20545

Name: LOC100290629	Sequence: fasta or formatted (596aa)		NCBI GI: 239750800
Description: PREDICTED: hypothetical protein XP_002347563		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 63 3 C cysteine 2.7 16 2 D aspartate 5.0 30 2 E glutamate 4.4 26 2 F phenylalanine 3.4 20 2 G glycine 8.4 50 2 H histidine 2.0 12 1 I isoleucine 3.7 22 2 K lysine 3.4 20 2 L leucine 8.9 53 2 M methionine 2.3 14 1 N asparagine 2.3 14 1 P proline 6.4 38 2 Q glutamine 4.2 25 2 R arginine 3.7 22 2 S serine 11.7 70 3 T threonine 5.0 30 3 V valine 8.6 51 2 W tryptophan 1.8 11 1 Y tyrosine 1.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347563 LOC390561 0.615 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.614 PREDICTED: similar to hect domain and RLD 2 HERC2 0.522 hect domain and RLD 2 HERC1 0.096 guanine nucleotide exchange factor p532 HERC4 0.066 hect domain and RLD 4 isoform b HERC4 0.066 hect domain and RLD 4 isoform a RCBTB2 0.066 regulator of chromosome condensation and BTB domain c... HERC5 0.059 hect domain and RLD 5 NEK8 0.056 NIMA-related kinase 8 HERC6 0.054 hect domain and RLD 6 RCBTB1 0.052 regulator of chromosome condensation (RCC1) and BTB ... HERC3 0.051 hect domain and RLD 3 RCC2 0.044 regulator of chromosome condensation 2 RCC2 0.044 regulator of chromosome condensation 2 SERGEF 0.042 deafness locus associated putative guanine nucleotide... IBTK 0.039 inhibitor of Bruton's tyrosine kinase ALS2 0.037 alsin isoform 1 RPGR 0.036 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.036 retinitis pigmentosa GTPase regulator isoform C [Hom... RCCD1 0.034 RCC1 domain containing 1 RCCD1 0.034 RCC1 domain containing 1 RCC1 0.030 regulator of chromosome condensation 1 isoform b [H... RCC1 0.030 regulator of chromosome condensation 1 isoform a [H... RCC1 0.030 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.030 regulator of chromosome condensation 1 SNHG3-RCC1 0.030 regulator of chromosome condensation 1 SNHG3-RCC1 0.030 regulator of chromosome condensation 1 NEK9 0.027 NIMA-related kinase 9 ALS2 0.026 alsin isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.