RPGR 29337

Name: RPGR	Sequence: fasta or formatted (815aa)		NCBI GI: 4506581
Description: retinitis pigmentosa GTPase regulator isoform A		Referenced in: Crystallins and Other Eye Proteins Kidney Left-Right Axis Ran and Rag
Other entries for this name: alt prot [1152aa] retinitis pigmentosa GTPase regulator isoform C
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 37 2 C cysteine 2.0 16 1 D aspartate 5.2 42 2 E glutamate 11.0 90 2 F phenylalanine 3.9 32 2 G glycine 7.7 63 2 H histidine 2.5 20 1 I isoleucine 5.0 41 2 K lysine 7.1 58 3 L leucine 8.1 66 2 M methionine 2.2 18 1 N asparagine 6.5 53 3 P proline 4.2 34 2 Q glutamine 3.7 30 2 R arginine 3.2 26 3 S serine 8.2 67 3 T threonine 7.1 58 2 V valine 5.6 46 2 W tryptophan 0.5 4 1 Y tyrosine 1.7 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.782 retinitis pigmentosa GTPase regulator isoform C [Hom... HERC3 0.085 hect domain and RLD 3 HERC4 0.080 hect domain and RLD 4 isoform b HERC4 0.080 hect domain and RLD 4 isoform a HERC1 0.077 guanine nucleotide exchange factor p532 RCC1 0.071 regulator of chromosome condensation 1 isoform b [H... HERC6 0.071 hect domain and RLD 6 RCBTB2 0.071 regulator of chromosome condensation and BTB domain c... RCC1 0.069 regulator of chromosome condensation 1 isoform a [H... RCC1 0.069 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.069 regulator of chromosome condensation 1 SNHG3-RCC1 0.069 regulator of chromosome condensation 1 SNHG3-RCC1 0.069 regulator of chromosome condensation 1 RCBTB1 0.066 regulator of chromosome condensation (RCC1) and BTB ... HERC2 0.064 hect domain and RLD 2 HERC5 0.059 hect domain and RLD 5 SERGEF 0.058 deafness locus associated putative guanine nucleotide... NEK9 0.058 NIMA-related kinase 9 NEK8 0.054 NIMA-related kinase 8 RCC2 0.045 regulator of chromosome condensation 2 RCC2 0.045 regulator of chromosome condensation 2 WBSCR16 0.035 Williams-Beuren syndrome chromosome region 16 LOC653375 0.032 PREDICTED: RCC1-like G exchanging factor-like [Homo... LOC653375 0.032 PREDICTED: RCC1-like G exchanging factor-like [Homo... RCCD1 0.030 RCC1 domain containing 1 RCCD1 0.030 RCC1 domain containing 1 ALS2 0.030 alsin isoform 2 ALS2 0.030 alsin isoform 1 LOC390561 0.027 PREDICTED: similar to hect domain and RLD 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.