HERC3 35680

Name: HERC3	Sequence: fasta or formatted (1050aa)		NCBI GI: 7657152
Description: hect domain and RLD 3		Referenced in: Ran and Rag Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 65 2 C cysteine 2.5 26 1 D aspartate 4.3 45 1 E glutamate 6.1 64 2 F phenylalanine 4.9 51 2 G glycine 7.7 81 2 H histidine 2.9 30 1 I isoleucine 5.1 54 2 K lysine 5.4 57 4 L leucine 12.4 130 4 M methionine 1.9 20 2 N asparagine 4.7 49 2 P proline 4.0 42 2 Q glutamine 4.9 51 2 R arginine 3.0 32 2 S serine 7.3 77 3 T threonine 4.9 51 2 V valine 6.6 69 2 W tryptophan 1.6 17 2 Y tyrosine 3.7 39 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hect domain and RLD 3 HERC4 0.545 hect domain and RLD 4 isoform b HERC4 0.545 hect domain and RLD 4 isoform a HERC6 0.300 hect domain and RLD 6 HERC5 0.282 hect domain and RLD 5 HECTD2 0.135 HECT domain containing 2 isoform a UBE3A 0.120 ubiquitin protein ligase E3A isoform 3 UBE3A 0.120 ubiquitin protein ligase E3A isoform 1 UBE3A 0.120 ubiquitin protein ligase E3A isoform 2 NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally dow... NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally do... NEDD4L 0.075 neural precursor cell expressed, developmentally do... ITCH 0.075 itchy homolog E3 ubiquitin protein ligase HECW2 0.075 HECT, C2 and WW domain containing E3 ubiquitin prote... HERC1 0.074 guanine nucleotide exchange factor p532 HERC2 0.072 hect domain and RLD 2 NEDD4 0.072 neural precursor cell expressed, developmentally do... NEDD4 0.072 neural precursor cell expressed, developmentally do... WWP2 0.070 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.070 WW domain containing E3 ubiquitin protein ligase 2 i... SMURF1 0.069 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.069 Smad ubiquitination regulatory factor 1 isoform 2 [H... HECW1 0.069 NEDD4-like ubiquitin-protein ligase 1 SMURF2 0.067 SMAD specific E3 ubiquitin protein ligase 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.