HERC4 34354

Name: HERC4	Sequence: fasta or formatted (1057aa)		NCBI GI: 63025188
Description: hect domain and RLD 4 isoform a		Referenced in: Ran and Rag Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [1049aa] hect domain and RLD 4 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 53 2 C cysteine 2.4 25 2 D aspartate 5.6 59 2 E glutamate 6.1 64 2 F phenylalanine 5.5 58 2 G glycine 7.9 84 3 H histidine 2.6 27 1 I isoleucine 6.1 64 2 K lysine 6.2 66 3 L leucine 11.4 120 3 M methionine 1.5 16 1 N asparagine 4.8 51 2 P proline 4.4 46 2 Q glutamine 4.5 48 3 R arginine 3.5 37 2 S serine 6.2 66 3 T threonine 4.6 49 2 V valine 7.0 74 3 W tryptophan 1.3 14 2 Y tyrosine 3.4 36 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hect domain and RLD 4 isoform a HERC4 0.989 hect domain and RLD 4 isoform b HERC3 0.540 hect domain and RLD 3 HERC6 0.294 hect domain and RLD 6 HERC5 0.286 hect domain and RLD 5 HECTD2 0.131 HECT domain containing 2 isoform a UBE3A 0.128 ubiquitin protein ligase E3A isoform 3 UBE3A 0.128 ubiquitin protein ligase E3A isoform 1 UBE3A 0.128 ubiquitin protein ligase E3A isoform 2 HERC2 0.076 hect domain and RLD 2 HECW2 0.073 HECT, C2 and WW domain containing E3 ubiquitin prote... WWP2 0.072 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.072 WW domain containing E3 ubiquitin protein ligase 2 i... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally dow... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally do... NEDD4L 0.071 neural precursor cell expressed, developmentally do... SMURF2 0.071 SMAD specific E3 ubiquitin protein ligase 2 HECW1 0.071 NEDD4-like ubiquitin-protein ligase 1 SMURF1 0.071 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.071 Smad ubiquitination regulatory factor 1 isoform 2 [H... ITCH 0.069 itchy homolog E3 ubiquitin protein ligase NEDD4 0.068 neural precursor cell expressed, developmentally do... NEDD4 0.068 neural precursor cell expressed, developmentally do... HERC1 0.068 guanine nucleotide exchange factor p532 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.