RCC1 1436

Name: RCC1	Sequence: fasta or formatted (438aa)		NCBI GI: 114796646
Description: regulator of chromosome condensation 1 isoform b		Referenced in: Ran and Rag Small RNAs in RNA Processing
Other entries for this name: alt prot [452aa] regulator of chromosome condensation 1 isoform a alt prot [421aa] regulator of chromosome condensation 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 29 3 C cysteine 2.1 9 1 D aspartate 4.6 20 2 E glutamate 5.7 25 2 F phenylalanine 3.0 13 1 G glycine 12.8 56 2 H histidine 2.7 12 2 I isoleucine 1.8 8 1 K lysine 5.5 24 2 L leucine 8.4 37 2 M methionine 2.7 12 2 N asparagine 2.5 11 2 P proline 4.3 19 2 Q glutamine 4.8 21 1 R arginine 5.5 24 2 S serine 9.1 40 2 T threonine 4.6 20 1 V valine 10.3 45 2 W tryptophan 0.9 4 1 Y tyrosine 2.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulator of chromosome condensation 1 isoform b [H... RCC1 0.988 regulator of chromosome condensation 1 isoform a [H... RCC1 0.949 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.949 regulator of chromosome condensation 1 SNHG3-RCC1 0.949 regulator of chromosome condensation 1 SNHG3-RCC1 0.949 regulator of chromosome condensation 1 HERC4 0.136 hect domain and RLD 4 isoform b HERC4 0.136 hect domain and RLD 4 isoform a RPGR 0.134 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.134 retinitis pigmentosa GTPase regulator isoform C [Hom... HERC3 0.125 hect domain and RLD 3 HERC2 0.115 hect domain and RLD 2 NEK9 0.098 NIMA-related kinase 9 RCC2 0.092 regulator of chromosome condensation 2 RCC2 0.092 regulator of chromosome condensation 2 HERC1 0.087 guanine nucleotide exchange factor p532 HERC6 0.085 hect domain and RLD 6 SERGEF 0.084 deafness locus associated putative guanine nucleotide... RCBTB1 0.075 regulator of chromosome condensation (RCC1) and BTB ... WBSCR16 0.072 Williams-Beuren syndrome chromosome region 16 RCBTB2 0.068 regulator of chromosome condensation and BTB domain c... NEK8 0.065 NIMA-related kinase 8 HERC5 0.064 hect domain and RLD 5 LOC653375 0.052 PREDICTED: RCC1-like G exchanging factor-like [Homo... LOC653375 0.052 PREDICTED: RCC1-like G exchanging factor-like [Homo... RCCD1 0.051 RCC1 domain containing 1 RCCD1 0.051 RCC1 domain containing 1 LOC390561 0.041 PREDICTED: similar to hect domain and RLD 2 LOC100290629 0.041 PREDICTED: hypothetical protein XP_002347563 LOC390561 0.041 PREDICTED: similar to hect domain and RLD 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.