HERC6 33971

Name: HERC6	Sequence: fasta or formatted (1022aa)		NCBI GI: 61563742
Description: hect domain and RLD 6		Referenced in: Ran and Rag Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 61 2 C cysteine 2.5 26 1 D aspartate 4.6 47 2 E glutamate 6.5 66 2 F phenylalanine 5.4 55 2 G glycine 6.2 63 2 H histidine 3.2 33 1 I isoleucine 5.3 54 2 K lysine 6.8 70 3 L leucine 10.5 107 4 M methionine 2.7 28 2 N asparagine 3.7 38 3 P proline 4.9 50 2 Q glutamine 4.8 49 1 R arginine 4.8 49 3 S serine 8.6 88 2 T threonine 4.8 49 2 V valine 5.3 54 2 W tryptophan 1.2 12 1 Y tyrosine 2.3 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hect domain and RLD 6 HERC5 0.445 hect domain and RLD 5 HERC3 0.310 hect domain and RLD 3 HERC4 0.306 hect domain and RLD 4 isoform a HERC4 0.305 hect domain and RLD 4 isoform b UBE3A 0.098 ubiquitin protein ligase E3A isoform 3 UBE3A 0.098 ubiquitin protein ligase E3A isoform 1 UBE3A 0.098 ubiquitin protein ligase E3A isoform 2 HECTD2 0.075 HECT domain containing 2 isoform a HERC2 0.063 hect domain and RLD 2 NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally dow... NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally do... NEDD4L 0.062 neural precursor cell expressed, developmentally do... HERC1 0.061 guanine nucleotide exchange factor p532 SMURF2 0.059 SMAD specific E3 ubiquitin protein ligase 2 NEDD4 0.058 neural precursor cell expressed, developmentally do... NEDD4 0.058 neural precursor cell expressed, developmentally do... SMURF1 0.058 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.058 Smad ubiquitination regulatory factor 1 isoform 2 [H... RPGR 0.056 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.056 retinitis pigmentosa GTPase regulator isoform C [Hom... HACE1 0.054 HECT domain and ankyrin repeat containing, E3 ubiqu... RCBTB2 0.051 regulator of chromosome condensation and BTB domain c... WWP2 0.050 WW domain containing E3 ubiquitin protein ligase 2 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.