LOC390561 22734

Name: LOC390561	Sequence: fasta or formatted (1102aa)		NCBI GI: 239756261
Description: PREDICTED: similar to hect domain and RLD 2		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [1052aa] PREDICTED: similar to hect domain and RLD 2 alt prot [691aa] PREDICTED: similar to hect domain and RLD 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 98 3 C cysteine 1.9 21 1 D aspartate 4.3 47 2 E glutamate 8.5 94 2 F phenylalanine 2.1 23 1 G glycine 8.3 92 3 H histidine 2.6 29 2 I isoleucine 3.0 33 2 K lysine 6.3 69 3 L leucine 9.7 107 2 M methionine 1.7 19 1 N asparagine 3.3 36 2 P proline 5.7 63 2 Q glutamine 6.3 69 2 R arginine 4.8 53 2 S serine 8.3 92 3 T threonine 4.4 48 3 V valine 6.2 68 2 W tryptophan 1.5 17 1 X unknown 0.5 5 1 Y tyrosine 1.7 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.815 PREDICTED: similar to hect domain and RLD 2 LOC390561 0.599 PREDICTED: similar to hect domain and RLD 2 LOC728498 0.352 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.352 PREDICTED: Golgin subfamily A member 8-like protein... LOC653720 0.346 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.344 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.340 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.340 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.340 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653061 0.334 PREDICTED: similar to Golgin subfamily A member 8-l... LOC643699 0.334 PREDICTED: similar to golgi autoantigen, golgin sub... LOC653061 0.333 PREDICTED: similar to Golgin subfamily A member 8-l... LOC100290629 0.330 PREDICTED: hypothetical protein XP_002347563 LOC728080 0.317 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728047 0.317 PREDICTED: similar to Golgin subfamily A member 8-l... LOC727909 0.317 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728498 0.313 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653073 0.312 PREDICTED: Golgin subfamily A member 8-like protein... LOC643699 0.311 PREDICTED: similar to golgi autoantigen, golgin sub... LOC653061 0.311 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653720 0.308 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653125 0.304 PREDICTED: similar to Golgin subfamily A member 8-l... GOLGA8B 0.286 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.286 golgi autoantigen, golgin subfamily a, 8A HERC2 0.277 hect domain and RLD 2 LOC653073 0.273 PREDICTED: Golgin subfamily A member 8-like protein... LOC653061 0.243 PREDICTED: similar to Golgin subfamily A member 8-l... GOLGA8G 0.210 golgi autoantigen, golgin subfamily a, 8G GOLGA8E 0.209 golgi autoantigen, golgin subfamily a, 8E Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.