RCCD1 34386

Name: RCCD1	Sequence: fasta or formatted (376aa)		NCBI GI: 63054860
Description: RCC1 domain containing 1		Referenced in: Ran and Rag
Other entries for this name: alt mRNA [376aa] RCC1 domain containing 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 49 2 C cysteine 1.9 7 1 D aspartate 3.7 14 2 E glutamate 8.5 32 2 F phenylalanine 2.7 10 1 G glycine 13.0 49 3 H histidine 1.9 7 1 I isoleucine 1.1 4 1 K lysine 2.1 8 1 L leucine 10.4 39 3 M methionine 0.8 3 1 N asparagine 1.3 5 1 P proline 6.1 23 1 Q glutamine 4.0 15 1 R arginine 6.9 26 2 S serine 5.9 22 1 T threonine 4.3 16 2 V valine 6.9 26 2 W tryptophan 3.2 12 1 Y tyrosine 2.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RCC1 domain containing 1 RCCD1 1.000 RCC1 domain containing 1 HERC2 0.120 hect domain and RLD 2 HERC5 0.119 hect domain and RLD 5 HERC3 0.107 hect domain and RLD 3 HERC6 0.101 hect domain and RLD 6 HERC4 0.100 hect domain and RLD 4 isoform b HERC4 0.100 hect domain and RLD 4 isoform a HERC1 0.096 guanine nucleotide exchange factor p532 RCBTB2 0.087 regulator of chromosome condensation and BTB domain c... RCC2 0.085 regulator of chromosome condensation 2 RCC2 0.085 regulator of chromosome condensation 2 NEK9 0.083 NIMA-related kinase 9 NEK8 0.072 NIMA-related kinase 8 RPGR 0.065 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.065 retinitis pigmentosa GTPase regulator isoform C [Hom... RCBTB1 0.063 regulator of chromosome condensation (RCC1) and BTB ... RCC1 0.060 regulator of chromosome condensation 1 isoform a [H... RCC1 0.059 regulator of chromosome condensation 1 isoform b [H... RCC1 0.059 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.059 regulator of chromosome condensation 1 SNHG3-RCC1 0.059 regulator of chromosome condensation 1 SNHG3-RCC1 0.059 regulator of chromosome condensation 1 SERGEF 0.056 deafness locus associated putative guanine nucleotide... ALS2 0.055 alsin isoform 1 LOC100290629 0.053 PREDICTED: hypothetical protein XP_002347563 LOC390561 0.053 PREDICTED: similar to hect domain and RLD 2 MYCBP2 0.053 MYC binding protein 2 ALS2 0.052 alsin isoform 2 WBSCR16 0.049 Williams-Beuren syndrome chromosome region 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.