HERC5 812

Name: HERC5	Sequence: fasta or formatted (1024aa)		NCBI GI: 110825982
Description: hect domain and RLD 5		Referenced in: Cyclins and Related Functions Ran and Rag Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 52 3 C cysteine 2.4 25 2 D aspartate 4.2 43 2 E glutamate 7.7 79 3 F phenylalanine 5.7 58 3 G glycine 6.5 67 2 H histidine 2.7 28 1 I isoleucine 4.6 47 2 K lysine 7.3 75 3 L leucine 11.4 117 2 M methionine 2.6 27 2 N asparagine 5.1 52 3 P proline 3.9 40 2 Q glutamine 4.1 42 1 R arginine 4.8 49 2 S serine 6.9 71 3 T threonine 4.9 50 3 V valine 5.6 57 2 W tryptophan 1.8 18 1 Y tyrosine 2.6 27 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hect domain and RLD 5 HERC6 0.441 hect domain and RLD 6 HERC4 0.295 hect domain and RLD 4 isoform a HERC4 0.294 hect domain and RLD 4 isoform b HERC3 0.288 hect domain and RLD 3 UBE3A 0.099 ubiquitin protein ligase E3A isoform 3 UBE3A 0.099 ubiquitin protein ligase E3A isoform 1 UBE3A 0.099 ubiquitin protein ligase E3A isoform 2 HECTD2 0.085 HECT domain containing 2 isoform a NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally dow... NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally do... NEDD4L 0.069 neural precursor cell expressed, developmentally do... HECW2 0.068 HECT, C2 and WW domain containing E3 ubiquitin prote... NEDD4 0.067 neural precursor cell expressed, developmentally do... NEDD4 0.067 neural precursor cell expressed, developmentally do... ITCH 0.063 itchy homolog E3 ubiquitin protein ligase HECW1 0.063 NEDD4-like ubiquitin-protein ligase 1 SMURF2 0.061 SMAD specific E3 ubiquitin protein ligase 2 SMURF1 0.059 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.059 Smad ubiquitination regulatory factor 1 isoform 2 [H... HERC2 0.058 hect domain and RLD 2 HERC1 0.055 guanine nucleotide exchange factor p532 WWP2 0.054 WW domain containing E3 ubiquitin protein ligase 2 i... WWP2 0.054 WW domain containing E3 ubiquitin protein ligase 2 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.