Guide to the Human Genome
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Name: NEK8 Sequence: fasta or formatted (692aa) NCBI GI: 30039692
Description:

NIMA-related kinase 8

Referenced in:

Dual-Specificity Protein Kinases
Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         55           2
 C cysteine            2.9         20           2
 D aspartate           3.2         22           1
 E glutamate           6.1         42           3
 F phenylalanine       2.6         18           2
 G glycine             9.5         66           3
 H histidine           3.0         21           2
 I isoleucine          5.1         35           2
 K lysine              3.6         25           1
 L leucine            11.7         81           2
 M methionine          2.2         15           1
 N asparagine          2.5         17           1
 P proline             6.4         44           3
 Q glutamine           4.8         33           2
 R arginine            6.1         42           2
 S serine              7.2         50           2
 T threonine           5.3         37           2
 V valine              7.2         50           2
 W tryptophan          0.7          5           1
 Y tyrosine            2.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NIMA-related kinase 8 
NEK9                  0.278   NIMA-related kinase 9 
NEK5                  0.163   NIMA-related kinase 5 
NEK1                  0.159   NIMA-related kinase 1 
NEK4                  0.140   NIMA-related kinase 4 
NEK2                  0.119   NIMA-related kinase 2 
NEK3                  0.119   NIMA-related kinase 3 isoform b 
NEK3                  0.119   NIMA-related kinase 3 isoform a 
NEK3                  0.119   NIMA-related kinase 3 isoform a 
NEK7                  0.111   NIMA-related kinase 7 
NEK11                 0.111   NIMA-related kinase 11 isoform 2 
NEK11                 0.111   NIMA-related kinase 11 isoform 3 
NEK11                 0.111   NIMA-related kinase 11 isoform 1 
NEK6                  0.111   NIMA-related kinase 6 isoform 1 
NEK6                  0.111   NIMA-related kinase 6 isoform 2 
STK36                 0.092   serine/threonine kinase 36 
HERC2                 0.092   hect domain and RLD 2 
SIK1                  0.086   SNF1-like kinase 
MARK2                 0.086   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.086   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.086   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.086   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.086   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK1                 0.083   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.083   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.083   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.083   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.083   MAP/microtubule affinity-regulating kinase 3 isoform...
NUAK1                 0.083   AMPK-related protein kinase 5 
MARK4                 0.083   MAP/microtubule affinity-regulating kinase 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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