Guide to the Human Genome
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Name: MXRA5 Sequence: fasta or formatted (2828aa) NCBI GI: 139948432
Description:

adlican

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7        160           3
 C cysteine            1.3         37           1
 D aspartate           4.6        129           2
 E glutamate           5.9        167           3
 F phenylalanine       2.6         74           2
 G glycine             6.1        173           2
 H histidine           2.7         76           1
 I isoleucine          4.8        135           2
 K lysine              5.7        161           2
 L leucine             8.6        244           2
 M methionine          2.2         61           1
 N asparagine          4.1        116           3
 P proline             8.0        227           2
 Q glutamine           4.1        116           2
 R arginine            5.4        154           3
 S serine              9.5        269           3
 T threonine           8.4        238           4
 V valine              6.7        189           2
 W tryptophan          1.2         33           1
 Y tyrosine            2.4         69           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adlican 
IGSF10                0.161   immunoglobulin superfamily, member 10 
HMCN1                 0.053   hemicentin 1 
HMCN2                 0.050   PREDICTED: hemicentin 2 
HMCN2                 0.050   PREDICTED: hemicentin 2 
HMCN2                 0.050   PREDICTED: hemicentin 2 
LOC100292387          0.039   PREDICTED: similar to hemicentin 2 
TTN                   0.035   titin isoform N2-A 
HSPG2                 0.032   heparan sulfate proteoglycan 2 
DSCAML1               0.027   Down syndrome cell adhesion molecule like 1 
PTK7                  0.026   PTK7 protein tyrosine kinase 7 isoform a precursor [...
L1CAM                 0.026   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.026   L1 cell adhesion molecule isoform 1 precursor 
PXDN                  0.026   peroxidasin 
DSCAM                 0.026   Down syndrome cell adhesion molecule isoform CHD2-42...
ROBO1                 0.025   roundabout 1 isoform b 
ROBO1                 0.025   roundabout 1 isoform a 
ROBO1                 0.023   roundabout 1 isoform d 
ROBO1                 0.023   roundabout 1 isoform c 
LOC642132             0.023   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.023   PREDICTED: similar to roundabout 1 isoform 2 
ROBO2                 0.022   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.022   roundabout, axon guidance receptor, homolog 2 isofor...
PTK7                  0.022   PTK7 protein tyrosine kinase 7 isoform d precursor [...
CNTN5                 0.022   contactin 5 isoform long 
CNTN5                 0.022   contactin 5 isoform short 
L1CAM                 0.021   L1 cell adhesion molecule isoform 3 precursor [Homo...
NRCAM                 0.021   neuronal cell adhesion molecule isoform A precursor ...
NRCAM                 0.021   neuronal cell adhesion molecule isoform B precursor ...
ROBO3                 0.020   roundabout, axon guidance receptor, homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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