VLDLR 34486

Name: VLDLR	Sequence: fasta or formatted (873aa)		NCBI GI: 65301167
Description: very low density lipoprotein receptor isoform a		Referenced in: Epidermal Growth Factor Lipoproteins
Other entries for this name: alt prot [845aa] very low density lipoprotein receptor isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 52 2 C cysteine 7.7 67 1 D aspartate 9.2 80 3 E glutamate 6.5 57 2 F phenylalanine 2.2 19 1 G glycine 7.6 66 2 H histidine 1.9 17 1 I isoleucine 5.8 51 2 K lysine 5.2 45 2 L leucine 6.5 57 4 M methionine 1.3 11 1 N asparagine 5.0 44 2 P proline 4.2 37 2 Q glutamine 3.4 30 1 R arginine 4.1 36 2 S serine 8.1 71 2 T threonine 5.2 45 2 V valine 5.5 48 2 W tryptophan 2.4 21 1 Y tyrosine 2.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 very low density lipoprotein receptor isoform a [Hom... VLDLR 0.962 very low density lipoprotein receptor isoform b [Hom... LDLR 0.479 low density lipoprotein receptor precursor LRP8 0.474 low density lipoprotein receptor-related protein 8 i... LRP8 0.471 low density lipoprotein receptor-related protein 8 i... LRP8 0.360 low density lipoprotein receptor-related protein 8 i... LRP8 0.341 low density lipoprotein receptor-related protein 8 i... LRP4 0.313 low density lipoprotein receptor-related protein 4 ... LRP1 0.280 low density lipoprotein-related protein 1 LRP2 0.269 low density lipoprotein-related protein 2 LRP1B 0.268 low density lipoprotein-related protein 1B precursor... SORL1 0.123 sortilin-related receptor containing LDLR class A rep... LRP5 0.121 low density lipoprotein receptor-related protein 5 ... LRP6 0.119 low density lipoprotein receptor-related protein 6 ... EGF 0.104 epidermal growth factor (beta-urogastrone) SSPO 0.084 SCO-spondin CORIN 0.082 corin ST14 0.065 matriptase NID1 0.061 nidogen 1 precursor NID2 0.058 nidogen 2 precursor LRP5L 0.055 low density lipoprotein receptor-related protein 5-l... LRP5L 0.055 low density lipoprotein receptor-related protein 5-... HSPG2 0.052 heparan sulfate proteoglycan 2 FBN1 0.050 fibrillin 1 precursor FBN2 0.045 fibrillin 2 precursor LDLRAD3 0.045 low density lipoprotein receptor class A domain cont... CD320 0.044 8D6 antigen LTBP1 0.043 latent transforming growth factor beta binding prote... LTBP1 0.043 latent transforming growth factor beta binding prote... SCUBE1 0.042 signal peptide, CUB domain, EGF-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.