VLDLR 34485

Name: VLDLR	Sequence: fasta or formatted (845aa)		NCBI GI: 65301164
Description: very low density lipoprotein receptor isoform b		Referenced in: Epidermal Growth Factor Lipoproteins
Other entries for this name: alt prot [873aa] very low density lipoprotein receptor isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 50 2 C cysteine 7.9 67 1 D aspartate 9.3 79 3 E glutamate 6.5 55 2 F phenylalanine 2.2 19 1 G glycine 7.5 63 2 H histidine 2.0 17 1 I isoleucine 5.9 50 2 K lysine 5.2 44 2 L leucine 6.6 56 4 M methionine 1.3 11 1 N asparagine 5.1 43 2 P proline 4.3 36 2 Q glutamine 3.6 30 1 R arginine 4.4 37 2 S serine 7.9 67 2 T threonine 4.3 36 2 V valine 5.4 46 2 W tryptophan 2.5 21 1 Y tyrosine 2.1 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 very low density lipoprotein receptor isoform b [Hom... VLDLR 0.990 very low density lipoprotein receptor isoform a [Hom... LDLR 0.476 low density lipoprotein receptor precursor LRP8 0.450 low density lipoprotein receptor-related protein 8 i... LRP8 0.450 low density lipoprotein receptor-related protein 8 i... LRP8 0.374 low density lipoprotein receptor-related protein 8 i... LRP4 0.321 low density lipoprotein receptor-related protein 4 ... LRP8 0.316 low density lipoprotein receptor-related protein 8 i... LRP1 0.287 low density lipoprotein-related protein 1 LRP2 0.277 low density lipoprotein-related protein 2 LRP1B 0.275 low density lipoprotein-related protein 1B precursor... SORL1 0.126 sortilin-related receptor containing LDLR class A rep... LRP5 0.123 low density lipoprotein receptor-related protein 5 ... LRP6 0.121 low density lipoprotein receptor-related protein 6 ... EGF 0.107 epidermal growth factor (beta-urogastrone) SSPO 0.087 SCO-spondin CORIN 0.085 corin ST14 0.067 matriptase NID1 0.062 nidogen 1 precursor NID2 0.060 nidogen 2 precursor LRP5L 0.056 low density lipoprotein receptor-related protein 5-l... LRP5L 0.056 low density lipoprotein receptor-related protein 5-... HSPG2 0.054 heparan sulfate proteoglycan 2 FBN1 0.052 fibrillin 1 precursor FBN2 0.046 fibrillin 2 precursor LDLRAD3 0.046 low density lipoprotein receptor class A domain cont... CD320 0.046 8D6 antigen LTBP1 0.045 latent transforming growth factor beta binding prote... LTBP1 0.045 latent transforming growth factor beta binding prote... SCUBE1 0.043 signal peptide, CUB domain, EGF-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.