NID1 1473

Name: NID1	Sequence: fasta or formatted (1247aa)		NCBI GI: 115298674
Description: nidogen 1 precursor		Referenced in: Epidermal Growth Factor Lipoproteins Extracellular Matrix
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 79 2 C cysteine 4.0 50 2 D aspartate 6.1 76 2 E glutamate 5.9 73 2 F phenylalanine 4.2 52 1 G glycine 9.1 113 2 H histidine 2.6 33 1 I isoleucine 4.4 55 2 K lysine 2.3 29 2 L leucine 6.6 82 3 M methionine 0.6 8 1 N asparagine 3.6 45 2 P proline 7.0 87 2 Q glutamine 4.7 59 2 R arginine 5.8 72 2 S serine 7.5 93 3 T threonine 7.8 97 2 V valine 7.0 87 3 W tryptophan 1.0 13 1 Y tyrosine 3.5 44 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nidogen 1 precursor NID2 0.305 nidogen 2 precursor LRP4 0.069 low density lipoprotein receptor-related protein 4 ... LRP5 0.064 low density lipoprotein receptor-related protein 5 ... LRP6 0.063 low density lipoprotein receptor-related protein 6 ... LRP1B 0.062 low density lipoprotein-related protein 1B precursor... LRP1 0.060 low density lipoprotein-related protein 1 EGF 0.054 epidermal growth factor (beta-urogastrone) LRP2 0.050 low density lipoprotein-related protein 2 LRP8 0.048 low density lipoprotein receptor-related protein 8 i... LRP8 0.048 low density lipoprotein receptor-related protein 8 i... LRP8 0.048 low density lipoprotein receptor-related protein 8 i... LRP8 0.048 low density lipoprotein receptor-related protein 8 i... LDLR 0.046 low density lipoprotein receptor precursor VLDLR 0.043 very low density lipoprotein receptor isoform b [Hom... VLDLR 0.043 very low density lipoprotein receptor isoform a [Hom... HMCN1 0.043 hemicentin 1 FBN3 0.041 fibrillin 3 precursor FBN2 0.039 fibrillin 2 precursor FBN1 0.039 fibrillin 1 precursor LRP5L 0.037 low density lipoprotein receptor-related protein 5-l... LRP5L 0.037 low density lipoprotein receptor-related protein 5-... HMCN2 0.036 PREDICTED: hemicentin 2 HMCN2 0.036 PREDICTED: hemicentin 2 HMCN2 0.036 PREDICTED: hemicentin 2 SORL1 0.034 sortilin-related receptor containing LDLR class A rep... NELL1 0.034 nel-like 1 isoform 1 precursor EMR1 0.031 egf-like module containing, mucin-like, hormone rece... NELL2 0.031 NEL-like protein 2 isoform d NELL2 0.031 NEL-like protein 2 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.