Guide to the Human Genome
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Name: CORIN Sequence: fasta or formatted (1042aa) NCBI GI: 29244926
Description:

corin

Referenced in:

Cardiovascular System
Lipoproteins
Serine Proteases
Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         38           2
 C cysteine            8.4         88           1
 D aspartate           6.6         69           3
 E glutamate           6.7         70           2
 F phenylalanine       3.1         32           2
 G glycine             6.7         70           2
 H histidine           3.0         31           2
 I isoleucine          4.1         43           2
 K lysine              3.6         38           2
 L leucine             8.9         93           3
 M methionine          2.1         22           1
 N asparagine          5.2         54           2
 P proline             4.8         50           2
 Q glutamine           4.6         48           2
 R arginine            4.2         44           2
 S serine              9.0         94           3
 T threonine           4.9         51           2
 V valine              5.6         58           2
 W tryptophan          2.0         21           1
 Y tyrosine            2.7         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   corin 
PRSS7                 0.094   enterokinase precursor 
TMPRSS2               0.090   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.090   transmembrane protease, serine 2 isoform 2 
SORL1                 0.089   sortilin-related receptor containing LDLR class A rep...
LRP1B                 0.087   low density lipoprotein-related protein 1B precursor...
ST14                  0.085   matriptase 
LRP1                  0.080   low density lipoprotein-related protein 1 
TMPRSS9               0.077   transmembrane protease, serine 9 
LRP2                  0.077   low density lipoprotein-related protein 2 
TMPRSS13              0.077   transmembrane protease, serine 13 
TMPRSS3               0.075   transmembrane protease, serine 3 isoform 1 
KLKB1                 0.073   plasma kallikrein B1 precursor 
TMPRSS6               0.072   transmembrane protease, serine 6 
TMPRSS5               0.072   transmembrane protease, serine 5 
PRSS36                0.070   protease, serine, 36 
F11                   0.069   coagulation factor XI precursor 
PRSS12                0.069   neurotrypsin precursor 
VLDLR                 0.068   very low density lipoprotein receptor isoform b [Hom...
VLDLR                 0.068   very low density lipoprotein receptor isoform a [Hom...
LRP4                  0.068   low density lipoprotein receptor-related protein 4 ...
TMPRSS4               0.067   transmembrane protease, serine 4 isoform 1 
PRSS8                 0.067   prostasin preproprotein 
TMPRSS4               0.067   transmembrane protease, serine 4 isoform 3 
TMPRSS11B             0.067   transmembrane protease, serine 11B 
PRSS27                0.067   marapsin 
TMPRSS7               0.066   transmembrane protease, serine 7 
TMPRSS11D             0.066   transmembrane protease, serine 11D 
PRSS33                0.064   protease, serine, 33 
PRSS21                0.062   testisin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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