ALS2 12312

Name: ALS2	Sequence: fasta or formatted (396aa)		NCBI GI: 209364523
Description: alsin isoform 2		Referenced in: Rab Ran and Rag
Other entries for this name: alt prot [1657aa] alsin isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 33 2 C cysteine 3.0 12 2 D aspartate 3.5 14 1 E glutamate 7.8 31 2 F phenylalanine 2.0 8 1 G glycine 6.8 27 2 H histidine 2.8 11 1 I isoleucine 4.3 17 2 K lysine 3.5 14 2 L leucine 9.3 37 2 M methionine 1.5 6 1 N asparagine 3.5 14 1 P proline 5.8 23 1 Q glutamine 5.8 23 2 R arginine 3.0 12 1 S serine 10.1 40 2 T threonine 6.8 27 2 V valine 8.6 34 2 W tryptophan 1.5 6 1 Y tyrosine 1.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alsin isoform 2 ALS2 0.934 alsin isoform 1 HERC4 0.083 hect domain and RLD 4 isoform b HERC4 0.083 hect domain and RLD 4 isoform a HERC3 0.083 hect domain and RLD 3 HERC6 0.079 hect domain and RLD 6 RCBTB1 0.074 regulator of chromosome condensation (RCC1) and BTB ... HERC1 0.070 guanine nucleotide exchange factor p532 HERC2 0.069 hect domain and RLD 2 RPGR 0.063 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.063 retinitis pigmentosa GTPase regulator isoform C [Hom... HERC5 0.062 hect domain and RLD 5 RCBTB2 0.061 regulator of chromosome condensation and BTB domain c... NEK8 0.058 NIMA-related kinase 8 RCCD1 0.051 RCC1 domain containing 1 RCCD1 0.051 RCC1 domain containing 1 SERGEF 0.044 deafness locus associated putative guanine nucleotide... LOC390561 0.040 PREDICTED: similar to hect domain and RLD 2 LOC100290629 0.040 PREDICTED: hypothetical protein XP_002347563 NEK9 0.039 NIMA-related kinase 9 RCC2 0.036 regulator of chromosome condensation 2 RCC2 0.036 regulator of chromosome condensation 2 WBSCR16 0.036 Williams-Beuren syndrome chromosome region 16 LOC390561 0.035 PREDICTED: similar to hect domain and RLD 2 RCC1 0.035 regulator of chromosome condensation 1 isoform b [H... RCC1 0.035 regulator of chromosome condensation 1 isoform a [H... RCC1 0.035 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.035 regulator of chromosome condensation 1 SNHG3-RCC1 0.035 regulator of chromosome condensation 1 SNHG3-RCC1 0.035 regulator of chromosome condensation 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.