Guide to the Human Genome
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Name: MYCBP2 Sequence: fasta or formatted (4640aa) NCBI GI: 126116565
Description:

MYC binding protein 2

Referenced in:

Myc and Related Functions
Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8        316           3
 C cysteine            3.1        142           2
 D aspartate           5.2        242           2
 E glutamate           6.6        307           4
 F phenylalanine       3.1        146           2
 G glycine             7.3        338           4
 H histidine           3.0        138           3
 I isoleucine          4.7        219           3
 K lysine              6.5        303           4
 L leucine             9.3        433           3
 M methionine          2.2        103           2
 N asparagine          3.6        169           2
 P proline             5.2        241           3
 Q glutamine           4.0        186           2
 R arginine            4.7        219           3
 S serine              9.6        446           4
 T threonine           5.5        257           2
 V valine              6.1        282           3
 W tryptophan          1.1         51           2
 Y tyrosine            2.2        102           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MYC binding protein 2 
HERC6                 0.006   hect domain and RLD 6 
HERC1                 0.005   guanine nucleotide exchange factor p532 
BTBD2                 0.005   BTB (POZ) domain containing 2 
HERC5                 0.005   hect domain and RLD 5 
BTBD1                 0.005   BTB (POZ) domain containing 1 isoform 1 
HERC4                 0.005   hect domain and RLD 4 isoform b 
HERC4                 0.005   hect domain and RLD 4 isoform a 
HERC3                 0.005   hect domain and RLD 3 
IBTK                  0.004   inhibitor of Bruton's tyrosine kinase 
BTBD6                 0.004   BTB domain protein BDPL 
RPGR                  0.004   retinitis pigmentosa GTPase regulator isoform A [Homo...
RPGR                  0.004   retinitis pigmentosa GTPase regulator isoform C [Hom...
HERC2                 0.004   hect domain and RLD 2 
RCCD1                 0.004   RCC1 domain containing 1 
RCCD1                 0.004   RCC1 domain containing 1 
RCBTB2                0.004   regulator of chromosome condensation and BTB domain c...
BTBD3                 0.004   BTB/POZ domain containing protein 3 isoform a 
BTBD3                 0.004   BTB/POZ domain containing protein 3 isoform b 
RCBTB1                0.004   regulator of chromosome condensation (RCC1) and BTB ...
NEK8                  0.004   NIMA-related kinase 8 
SRRM2                 0.004   splicing coactivator subunit SRm300 
RCC2                  0.003   regulator of chromosome condensation 2 
RCC2                  0.003   regulator of chromosome condensation 2 
ALS2                  0.003   alsin isoform 1 
DSPP                  0.003   dentin sialophosphoprotein preproprotein 
RCC1                  0.003   regulator of chromosome condensation 1 isoform b [H...
RCC1                  0.003   regulator of chromosome condensation 1 isoform a [H...
RCC1                  0.003   regulator of chromosome condensation 1 isoform c [Hom...
SNHG3-RCC1            0.003   regulator of chromosome condensation 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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