ALS2 27452

Name: ALS2	Sequence: fasta or formatted (1657aa)		NCBI GI: 40316935
Description: alsin isoform 1		Referenced in: Rab Ran and Rag
Other entries for this name: alt prot [396aa] alsin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 103 2 C cysteine 1.9 32 2 D aspartate 4.5 75 2 E glutamate 7.1 117 3 F phenylalanine 3.5 58 2 G glycine 7.8 130 2 H histidine 2.4 39 2 I isoleucine 3.8 63 2 K lysine 5.3 88 2 L leucine 11.4 189 3 M methionine 1.8 29 2 N asparagine 3.0 49 1 P proline 5.1 85 2 Q glutamine 4.6 76 2 R arginine 4.6 77 2 S serine 9.3 154 3 T threonine 6.1 101 4 V valine 6.5 107 3 W tryptophan 1.7 28 1 Y tyrosine 3.4 57 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alsin isoform 1 ALS2 0.217 alsin isoform 2 ALS2CL 0.145 ALS2 C-terminal like isoform 1 ALS2CL 0.049 ALS2 C-terminal like isoform 3 RSPH10B2 0.022 radial spoke head 10 homolog B2 RSPH10B 0.022 radial spoke head 10 homolog B HERC4 0.019 hect domain and RLD 4 isoform b HERC4 0.019 hect domain and RLD 4 isoform a HERC2 0.019 hect domain and RLD 2 HERC3 0.019 hect domain and RLD 3 HERC6 0.018 hect domain and RLD 6 RSPH1 0.017 testis-specific gene A2 RCBTB1 0.017 regulator of chromosome condensation (RCC1) and BTB ... MORN1 0.017 MORN repeat containing 1 HERC1 0.016 guanine nucleotide exchange factor p532 MORN3 0.015 MORN repeat containing 3 RPGR 0.015 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.015 retinitis pigmentosa GTPase regulator isoform C [Hom... HERC5 0.014 hect domain and RLD 5 RCC2 0.014 regulator of chromosome condensation 2 RCC2 0.014 regulator of chromosome condensation 2 RCBTB2 0.014 regulator of chromosome condensation and BTB domain c... NEK8 0.014 NIMA-related kinase 8 LOC100290629 0.013 PREDICTED: hypothetical protein XP_002347563 LOC390561 0.013 PREDICTED: similar to hect domain and RLD 2 JPH2 0.013 junctophilin 2 isoform 1 JPH3 0.013 junctophilin 3 RCCD1 0.012 RCC1 domain containing 1 RCCD1 0.012 RCC1 domain containing 1 LOC390561 0.012 PREDICTED: similar to hect domain and RLD 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.