Guide to the Human Genome
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Name: IGFBP7 Sequence: fasta or formatted (282aa) NCBI GI: 4504619
Description:

insulin-like growth factor binding protein 7

Referenced in:

Growth Hormone and Related Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         25           3
 C cysteine            6.4         18           2
 D aspartate           2.8          8           1
 E glutamate           6.7         19           1
 F phenylalanine       0.0          0           0
 G glycine            13.8         39           4
 H histidine           1.4          4           1
 I isoleucine          3.2          9           1
 K lysine              5.3         15           2
 L leucine             8.9         25           6
 M methionine          1.1          3           1
 N asparagine          1.4          4           1
 P proline             8.2         23           2
 Q glutamine           3.2          9           1
 R arginine            5.7         16           2
 S serine              8.5         24           6
 T threonine           4.6         13           2
 V valine              6.7         19           2
 W tryptophan          1.1          3           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor binding protein 7 
IGFBPL1               0.355   insulin-like growth factor binding protein-like 1 [H...
KAZALD1               0.262   Kazal-type serine peptidase inhibitor domain 1 precu...
HTRA1                 0.142   HtrA serine peptidase 1 precursor 
HTRA4                 0.115   HtrA serine peptidase 4 precursor 
HTRA3                 0.105   HtrA serine peptidase 3 
OBSL1                 0.057   obscurin-like 1 
SDK2                  0.051   sidekick 2 
AGRN                  0.051   agrin 
LOC100134174          0.051   PREDICTED: similar to sidekick homolog 2 (chicken) ...
IGFBP5                0.048   insulin-like growth factor binding protein 5 
CRIM1                 0.048   cysteine-rich motor neuron 1 
HMCN2                 0.048   PREDICTED: hemicentin 2 
HMCN2                 0.048   PREDICTED: hemicentin 2 
HMCN2                 0.048   PREDICTED: hemicentin 2 
SDK1                  0.043   sidekick 1 
LRIT3                 0.043   leucine-rich repeat, immunoglobulin-like and transm...
PTPRS                 0.043   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.043   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.043   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.043   protein tyrosine phosphatase, receptor type, sigma ...
MYPN                  0.043   myopalladin 
HSPG2                 0.041   heparan sulfate proteoglycan 2 
LRIG3                 0.041   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.041   leucine-rich repeats and immunoglobulin-like domain...
PXDN                  0.041   peroxidasin 
LRIG2                 0.041   leucine-rich repeats and immunoglobulin-like domains ...
LRRC24                0.039   leucine rich repeat containing 24 
FGFR1                 0.039   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR1                 0.039   fibroblast growth factor receptor 1 isoform 4 precur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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