Guide to the Human Genome
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Name: TG Sequence: fasta or formatted (2768aa) NCBI GI: 55770862
Description:

thyroglobulin

Referenced in:

Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2        199           3
 C cysteine            4.4        123           2
 D aspartate           4.5        125           2
 E glutamate           6.1        169           4
 F phenylalanine       5.1        141           2
 G glycine             7.6        209           2
 H histidine           1.4         39           1
 I isoleucine          3.0         84           2
 K lysine              3.3         91           2
 L leucine             9.4        261           3
 M methionine          1.4         38           2
 N asparagine          3.0         82           2
 P proline             6.2        173           2
 Q glutamine           7.0        194           3
 R arginine            5.4        150           3
 S serine              9.8        270           4
 T threonine           5.2        145           3
 V valine              5.9        164           3
 W tryptophan          1.6         45           2
 Y tyrosine            2.4         66           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thyroglobulin 
ACHE                  0.037   acetylcholinesterase isoform E4-E6 precursor 
ACHE                  0.037   acetylcholinesterase isoform E4-E5 precursor 
BCHE                  0.034   butyrylcholinesterase precursor 
NLGN3                 0.030   neuroligin 3 
NLGN4X                0.030   X-linked neuroligin 4 
NLGN4X                0.030   X-linked neuroligin 4 
NLGN4Y                0.029   neuroligin 4, Y-linked 
NLGN2                 0.029   neuroligin 2 
CES3                  0.028   carboxylesterase 3 
NLGN1                 0.028   neuroligin 1 
CES2                  0.027   carboxylesterase 2 isoform 2 
CES2                  0.027   carboxylesterase 2 isoform 1 
CES7                  0.025   carboxylesterase 7 isoform 1 
CEL                   0.023   carboxyl ester lipase precursor 
CES1                  0.023   carboxylesterase 1 isoform a precursor 
CES1                  0.023   carboxylesterase 1 isoform b precursor 
CES1                  0.023   carboxylesterase 1 isoform c precursor 
CES7                  0.023   carboxylesterase 7 isoform 2 
CES8                  0.020   carboxylesterase 8 (putative) 
LOC649264             0.012   PREDICTED: similar to hCG40360 
LOC649264             0.012   PREDICTED: similar to hCG40360 
NID2                  0.011   nidogen 2 precursor 
SMOC2                 0.010   SPARC related modular calcium binding 2 
SMOC1                 0.009   secreted modular calcium-binding protein 1 isoform 1...
SMOC1                 0.009   secreted modular calcium-binding protein 1 isoform 2...
LOC649264             0.008   PREDICTED: similar to hCG40360 
SCUBE3                0.006   signal peptide, CUB domain, EGF-like 3 
NID1                  0.006   nidogen 1 precursor 
SPOCK3                0.005   testican 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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