Guide to the Human Genome
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Name: ESM1 Sequence: fasta or formatted (184aa) NCBI GI: 5901946
Description:

endothelial cell-specific molecule 1 isoform a precursor

Not currently referenced in the text

Other entries for this name:
alt prot {134aa} endothelial cell-specific molecule 1 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          9           2
 C cysteine            9.8         18           2
 D aspartate           6.0         11           2
 E glutamate           5.4         10           2
 F phenylalanine       3.8          7           2
 G glycine             9.8         18           1
 H histidine           1.6          3           1
 I isoleucine          1.6          3           1
 K lysine              5.4         10           1
 L leucine             6.0         11           3
 M methionine          3.3          6           1
 N asparagine          4.3          8           2
 P proline             5.4         10           1
 Q glutamine           2.2          4           1
 R arginine            6.5         12           1
 S serine              8.2         15           2
 T threonine           5.4         10           2
 V valine              7.1         13           2
 W tryptophan          1.1          2           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endothelial cell-specific molecule 1 isoform a precur... 
ESM1                  0.645   endothelial cell-specific molecule 1 isoform b prec...
CRIM1                 0.085   cysteine-rich motor neuron 1 
HTRA4                 0.080   HtrA serine peptidase 4 precursor 
SCARF1                0.077   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.077   scavenger receptor class F, member 1 isoform 1 precu...
MEGF6                 0.072   EGF-like-domain, multiple 3 
MEGF10                0.069   multiple EGF-like-domains 10 
HTRA3                 0.066   HtrA serine peptidase 3 
HTRA1                 0.066   HtrA serine peptidase 1 precursor 
NOV                   0.066   nephroblastoma overexpressed precursor 
IGFBP4                0.061   insulin-like growth factor binding protein 4 precurs...
PEAR1                 0.058   platelet endothelial aggregation receptor 1 
MEGF11                0.058   multiple EGF-like-domains 11 
IGFBP5                0.056   insulin-like growth factor binding protein 5 
CTGF                  0.053   connective tissue growth factor 
TIE1                  0.053   tyrosine kinase with immunoglobulin-like and EGF-like...
IGFBP3                0.053   insulin-like growth factor binding protein 3 isoform...
IGFBP3                0.053   insulin-like growth factor binding protein 3 isoform...
WISP2                 0.053   WNT1 inducible signaling pathway protein 2 precursor ...
LAMA5                 0.050   laminin alpha 5 
IGFBPL1               0.050   insulin-like growth factor binding protein-like 1 [H...
STAB1                 0.050   stabilin 1 precursor 
SCARF2                0.050   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.050   scavenger receptor class F, member 2 isoform 2 [Homo...
TEK                   0.048   TEK tyrosine kinase, endothelial precursor 
IGFBP2                0.048   insulin-like growth factor binding protein 2, 36kDa ...
STAB2                 0.045   stabilin 2 precursor 
LAMA4                 0.042   laminin, alpha 4 isoform 2 precursor 
LAMA4                 0.042   laminin, alpha 4 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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