Guide to the Human Genome
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Name: CRIM1 Sequence: fasta or formatted (1036aa) NCBI GI: 10092639
Description:

cysteine-rich motor neuron 1

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         39           2
 C cysteine           12.5        130           2
 D aspartate           5.5         57           2
 E glutamate           6.9         71           3
 F phenylalanine       2.8         29           1
 G glycine             7.1         74           2
 H histidine           1.9         20           3
 I isoleucine          4.7         49           3
 K lysine              3.9         40           2
 L leucine             7.0         73           5
 M methionine          1.0         10           1
 N asparagine          4.7         49           2
 P proline             8.4         87           2
 Q glutamine           3.7         38           2
 R arginine            5.0         52           1
 S serine              6.4         66           2
 T threonine           5.1         53           1
 V valine              6.3         65           3
 W tryptophan          0.9          9           1
 Y tyrosine            2.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine-rich motor neuron 1 
KCP                   0.088   cysteine rich BMP regulator 2 isoform 1 
KCP                   0.081   cysteine rich BMP regulator 2 isoform 2 
NELL1                 0.054   nel-like 1 isoform 1 precursor 
FRAS1                 0.053   Fraser syndrome 1 
NELL1                 0.051   nel-like 1 isoform 2 precursor 
VWCE                  0.048   von Willebrand factor C and EGF domains 
BMPER                 0.048   BMP-binding endothelial regulator precursor protein ...
NELL2                 0.040   NEL-like protein 2 isoform d 
NELL2                 0.040   NEL-like protein 2 isoform c 
NELL2                 0.040   NEL-like protein 2 isoform b precursor 
NELL2                 0.040   NEL-like protein 2 isoform a 
NELL2                 0.040   NEL-like protein 2 isoform b precursor 
CHRDL1                0.032   chordin-like 1 isoform 1 precursor 
CHRDL1                0.031   chordin-like 1 isoform 2 precursor 
CHRDL1                0.030   chordin-like 1 isoform 3 precursor 
CHRDL2                0.030   chordin-like 2 
CHRD                  0.026   chordin 
MUC2                  0.025   mucin 2 precursor 
LOC100294420          0.025   PREDICTED: similar to mucin 2 
VWF                   0.025   von Willebrand factor preproprotein 
NOTCH1                0.024   notch1 preproprotein 
VWC2                  0.024   von Willebrand factor C domain containing 2 
NOTCH3                0.020   Notch homolog 3 
JAG2                  0.020   jagged 2 isoform b precursor 
FBN3                  0.020   fibrillin 3 precursor 
JAG1                  0.019   jagged 1 precursor 
LOC100131696          0.019   PREDICTED: keratin associated protein 
LOC100131696          0.019   PREDICTED: keratin associated protein 
LOC100288060          0.019   PREDICTED: hypothetical protein XP_002343557 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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