Guide to the Human Genome
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Name: HTRA3 Sequence: fasta or formatted (453aa) NCBI GI: 22129776
Description:

HtrA serine peptidase 3

Referenced in:

Growth Hormone and Related Hormones
Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         40           2
 C cysteine            3.5         16           2
 D aspartate           5.5         25           2
 E glutamate           4.9         22           1
 F phenylalanine       2.9         13           1
 G glycine             8.2         37           2
 H histidine           1.8          8           1
 I isoleucine          6.6         30           2
 K lysine              4.0         18           3
 L leucine            10.4         47           3
 M methionine          1.1          5           1
 N asparagine          3.5         16           1
 P proline             7.1         32           2
 Q glutamine           4.2         19           2
 R arginine            6.2         28           2
 S serine              7.9         36           2
 T threonine           4.0         18           2
 V valine              7.5         34           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HtrA serine peptidase 3 
HTRA1                 0.550   HtrA serine peptidase 1 precursor 
HTRA4                 0.453   HtrA serine peptidase 4 precursor 
HTRA2                 0.358   HtrA serine peptidase 2 isoform 1 preproprotein [Homo...
HTRA2                 0.101   HtrA serine peptidase 2 isoform 2 
IGFBP7                0.067   insulin-like growth factor binding protein 7 
KAZALD1               0.054   Kazal-type serine peptidase inhibitor domain 1 precu...
IGFBPL1               0.054   insulin-like growth factor binding protein-like 1 [H...
CRIM1                 0.034   cysteine-rich motor neuron 1 
ESM1                  0.028   endothelial cell-specific molecule 1 isoform a precur...
ESM1                  0.028   endothelial cell-specific molecule 1 isoform b prec...
IGFBP3                0.027   insulin-like growth factor binding protein 3 isoform...
IGFBP3                0.027   insulin-like growth factor binding protein 3 isoform...
CYR61                 0.025   cysteine-rich, angiogenic inducer, 61 
WISP2                 0.024   WNT1 inducible signaling pathway protein 2 precursor ...
NOV                   0.023   nephroblastoma overexpressed precursor 
AGRN                  0.020   agrin 
CTGF                  0.019   connective tissue growth factor 
PDZD3                 0.017   PDZ domain containing 3 
IGFBP2                0.016   insulin-like growth factor binding protein 2, 36kDa ...
WISP3                 0.016   WNT1 inducible signaling pathway protein 3 isoform 3...
WISP3                 0.016   WNT1 inducible signaling pathway protein 3 isoform 1 ...
ARHGEF11              0.016   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.016   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
ARHGAP23              0.015   Rho GTPase activating protein 23 
IGFBP5                0.015   insulin-like growth factor binding protein 5 
LOC100292632          0.014   PREDICTED: hypothetical protein 
LCE1E                 0.014   late cornified envelope 1E 
LCE1C                 0.014   late cornified envelope 1C 
IGFBP4                0.014   insulin-like growth factor binding protein 4 precurs...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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